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MAG for uncultured archaeon

Identifiers
BioSample: SAMEA114812317; SRA: ERS17237184
Organism
uncultured archaeon
cellular organisms; Archaea; environmental samples
Attributes
broad-scale environmental contextCoastal
collection date2020-09-24
environmental mediumnot collected
geographic locationDenmark
isolation sourcesoil
project nameMicroflora Danica
sample nameMFD02416.bin.1.261
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114812317
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T09:59:16Z
INSDC statuspublic
Submitter IdMFD02416.bin.1.261
assembly qualitySingle contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score96.79
completeness softwareCheckM2
contamination score2.31
geographic location (latitude)56.8577
geographic location (longitude)9.5553
local environmental contextSalt marshes and salt meadows
metagenomic sourcesoil metagenome
sample derived fromERS14381625
scientific_nameuncultured archaeon
taxonomic identity markermulti-marker approach
Description

HQ MAG for uncultured archaeon, recovered from an environmental sample from Denmark

Submission
EBI; 2024-12-26
Accession:
SAMEA114812317
ID:
45978029

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