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MAG for uncultured Acidobacteriota bacterium

Identifiers
BioSample: SAMEA114812002; SRA: ERS17236869
Organism
uncultured Acidobacteriota bacterium
cellular organisms; Bacteria; Pseudomonadati; Acidobacteriota; environmental samples
Attributes
broad-scale environmental contextGrassland formations
collection date2021-05-11
environmental mediumnot collected
geographic locationDenmark
isolation sourcesoil
project nameMicroflora Danica
sample nameMFD02242.bin.2.321
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114812002
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T09:59:14Z
INSDC statuspublic
Submitter IdMFD02242.bin.2.321
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score54.52
completeness softwareCheckM2
contamination score2.71
geographic location (latitude)56.2065
geographic location (longitude)10.105
local environmental contextSemi-natural tall-herb humid meadows
metagenomic sourcesoil metagenome
sample derived fromERS15928277
scientific_nameuncultured Acidobacteriota bacterium
taxonomic identity markermulti-marker approach
Description

MQ MAG for uncultured Acidobacteriota bacterium, recovered from an environmental sample from Denmark

BioProject
PRJEB58634 MFD-LR MAGs — long-read metagenome assembled genomes from the Microflora Danica sequencing project
Retrieve all samples from this project

Submission
EBI; 2024-12-26
Accession:
SAMEA114812002
ID:
45978545

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