U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MAG for uncultured Solirubrobacterales bacterium

Identifiers
BioSample: SAMEA114809567; SRA: ERS17234434
Organism
uncultured Solirubrobacterales bacterium
cellular organisms; Bacteria; Bacillati; Actinomycetota; Thermoleophilia; Solirubrobacterales; environmental samples
Attributes
broad-scale environmental contextFreshwater
collection date2020-05-07
environmental mediumnot collected
geographic locationDenmark
isolation sourcesediment
project nameMicroflora Danica
sample nameMFD00991.bin.2.121
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114809567
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T09:58:58Z
INSDC statuspublic
Submitter IdMFD00991.bin.2.121
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score88.35
completeness softwareCheckM2
contamination score1.57
geographic location (latitude)56.52110487
geographic location (longitude)10.41869213
local environmental contextStanding freshwater
metagenomic sourcesediment metagenome
sample derived fromERS15928272
scientific_nameuncultured Solirubrobacterales bacterium
taxonomic identity markermulti-marker approach
Description

MQ MAG for uncultured Solirubrobacterales bacterium, recovered from an environmental sample from Denmark

BioProject
PRJEB58634 MFD-LR MAGs — long-read metagenome assembled genomes from the Microflora Danica sequencing project
Retrieve all samples from this project

Submission
EBI; 2024-12-26
Accession:
SAMEA114809567
ID:
45977448

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center