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MAG for Candidatus Methanoperedenaceae archaeon

Identifiers
BioSample: SAMEA114809264; SRA: ERS17234131
Organism
Candidatus Methanoperedenaceae archaeon
cellular organisms; Archaea; Methanobacteriati; Methanobacteriota; Stenosarchaea group; Methanomicrobia; Methanosarcinales; ANME-2 cluster; Candidatus Methanoperedenaceae; unclassified Candidatus Methanoperedenaceae
Attributes
broad-scale environmental contextFreshwater
collection date2020-05-28
environmental mediumnot collected
geographic locationDenmark
isolation sourcesediment
project nameMicroflora Danica
sample nameMFD00905.bin.3.332
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114809264
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T09:58:56Z
INSDC statuspublic
Submitter IdMFD00905.bin.3.332
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score57.84
completeness softwareCheckM2
contamination score4.94
geographic location (latitude)55.91690451
geographic location (longitude)9.831926013
local environmental contextStanding freshwater
metagenomic sourcesediment metagenome
sample derived fromERS15928271
scientific_nameCandidatus Methanoperedenaceae archaeon
taxonomic identity markermulti-marker approach
Description

MQ MAG for Candidatus Methanoperedenaceae archaeon, recovered from an environmental sample from Denmark

BioProject
PRJEB58634 MFD-LR MAGs — long-read metagenome assembled genomes from the Microflora Danica sequencing project
Retrieve all samples from this project

Submission
EBI; 2024-12-26
Accession:
SAMEA114809264
ID:
45982014

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