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MAG for uncultured bacterium

Identifiers
BioSample: SAMEA114808962; SRA: ERS17233829
Organism
uncultured bacterium
cellular organisms; Bacteria; environmental samples
Attributes
broad-scale environmental contextDunes
collection date2020-04-02
environmental mediumnot collected
geographic locationDenmark
isolation sourcesoil
project nameMicroflora Danica
sample nameMFD00731.bin.2.58
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114808962
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T09:58:54Z
INSDC statuspublic
Submitter IdMFD00731.bin.2.58
assembly qualitySingle contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score88.5
completeness softwareCheckM2
contamination score0.58
geographic location (latitude)56.2289
geographic location (longitude)10.2307
local environmental contextInland dunes
metagenomic sourcesoil metagenome
sample derived fromERS14381615
scientific_nameuncultured bacterium
taxonomic identity markermulti-marker approach
Description

MQ MAG for uncultured bacterium, recovered from an environmental sample from Denmark

Submission
EBI; 2024-12-26
Accession:
SAMEA114808962
ID:
45982081

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