U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MAG for uncultured Gammaproteobacteria bacterium

Identifiers
BioSample: SAMEA114808955; SRA: ERS17233822
Organism
uncultured Gammaproteobacteria bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; environmental samples
Attributes
broad-scale environmental contextDunes
collection date2020-04-02
environmental mediumnot collected
geographic locationDenmark
isolation sourcesoil
project nameMicroflora Danica
sample nameMFD00731.bin.2.35
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114808955
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T09:58:54Z
INSDC statuspublic
Submitter IdMFD00731.bin.2.35
assembly qualitySingle contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score71.29
completeness softwareCheckM2
contamination score0.53
geographic location (latitude)56.2289
geographic location (longitude)10.2307
local environmental contextInland dunes
metagenomic sourcesoil metagenome
sample derived fromERS14381615
scientific_nameuncultured Gammaproteobacteria bacterium
taxonomic identity markermulti-marker approach
Description

MQ MAG for uncultured Gammaproteobacteria bacterium, recovered from an environmental sample from Denmark

Submission
EBI; 2024-12-26
Accession:
SAMEA114808955
ID:
45986573

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center