MAG for uncultured Gammaproteobacteria bacterium

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Result Filters

Organism: uncultured Gammaproteobacteria bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; environmental samples

Attributes

broad-scale environmental context	Freshwater
collection date	2020-04-30
environmental medium	not collected
geographic location	Denmark
isolation source	sediment
project name	Microflora Danica
sample name	MFD00709.bin.3.183
ENA first public	2024-12-25
ENA-CHECKLIST	ERC000011
External Id	SAMEA114808858
INSDC center name	Center for Microbial Communities
INSDC last update	2023-12-07T09:58:54Z
INSDC status	public
Submitter Id	MFD00709.bin.3.183
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
binning parameters	Ensemble iterative binning using coverage and kmer
binning software	MetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score	57.98
completeness software	CheckM2
contamination score	1.27
geographic location (latitude)	55.9091489
geographic location (longitude)	9.854411784
local environmental context	Standing freshwater
metagenomic source	sediment metagenome
sample derived from	ERS16252355
scientific_name	uncultured Gammaproteobacteria bacterium
taxonomic identity marker	multi-marker approach

Description: MQ MAG for uncultured Gammaproteobacteria bacterium, recovered from an environmental sample from Denmark

BioProject: PRJEB58634 MFD-LR MAGs — long-read metagenome assembled genomes from the Microflora Danica sequencing project
Retrieve all samples from this project