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MAG for uncultured Thermoplasmata archaeon

Identifiers
BioSample: SAMEA114808817; SRA: ERS17233684
Organism
uncultured Thermoplasmata archaeon
cellular organisms; Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata; environmental samples
Attributes
broad-scale environmental contextFreshwater
collection date2020-04-30
environmental mediumnot collected
geographic locationDenmark
isolation sourcesediment
project nameMicroflora Danica
sample nameMFD00709.bin.2.183
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114808817
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T09:58:53Z
INSDC statuspublic
Submitter IdMFD00709.bin.2.183
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score67.87
completeness softwareCheckM2
contamination score0.12
geographic location (latitude)55.9091489
geographic location (longitude)9.854411784
local environmental contextStanding freshwater
metagenomic sourcesediment metagenome
sample derived fromERS16252355
scientific_nameuncultured Thermoplasmata archaeon
taxonomic identity markermulti-marker approach
Description

MQ MAG for uncultured Thermoplasmata archaeon, recovered from an environmental sample from Denmark

BioProject
PRJEB58634 MFD-LR MAGs — long-read metagenome assembled genomes from the Microflora Danica sequencing project
Retrieve all samples from this project

Submission
EBI; 2024-12-26
Accession:
SAMEA114808817
ID:
45972429

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