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Unknown Bacterium AM_0764

Identifiers
BioSample: SAMEA104651811; SRA: ERS2253194
Organism
bacterium
cellular organisms; Bacteria; unclassified Bacteria
Attributes
isolateAM_0764
sample nameAM_0764
sample typemetagenomic assembly
ENA first public2020-02-25
ENA last update2018-02-26
ENA-CHECKLISTERC000011
External IdSAMEA104651811
INSDC center aliasUniversidade Federal de Sao Carlos - UFSCar
INSDC center nameUniversidade Federal de Sao Carlos - UFSCar
INSDC first public2020-02-25T04:07:52Z
INSDC last update2018-02-26T10:47:54Z
INSDC statuspublic
Submitter IdAM_0764
annotation_methodProkka 1.12
assembly methodMegahit v.1
biosamplemodelMicrobe, viral or environmental
completeness_estimated86.77
contamination_estimated1.1
environmental sampleYes
geographic location (country and/or atlantic ocean)Brazil
geographic location (region and locality)Amazon river Upstream section
mapping_methodBWA (BWA-MEM)
metagenomicTRUE
quality_assessment_methodCheckM
refinement_methodRefineM
Description

Uncultivated unknown Bacterium AM_0764 genome recovered from a co-assembly of the ERR2346693 and SRR1522971 metagenomes.

BioProject
PRJEB25176 Metagenome-Assembled Genomes from Amazon river basin
Retrieve all samples from this project

Submission
EBI; 2020-02-26
Accession:
SAMEA104651811
ID:
14210647

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