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Uncultivated Flavobacteriaceae bacterium UBA3478 genome recovered from SRX504487

Identifiers
BioSample: SAMN06453475; Sample name: Flavobacteriaceae bacterium UBA3478; SRA: SRS2034116
Organism
Flavobacteriaceae bacterium UBA3478
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; unclassified Flavobacteriaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA3478
isolation sourcewater
metagenome sourceaquatic metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX504487 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated93.40%
contamination_estimated0.74%
environmental_sampletrue
genome_coverage22.01
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the aquatic metagenome reads: SRR1209977.
Description

Uncultivated genome recovered from an assembly of the SRX504487 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06453475
ID:
6453475

BioProject SRA Nucleotide

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