Microbe sample from Ectopseudomonas oleovorans - BioSample - NCBI

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Microbe sample from Ectopseudomonas oleovorans

Identifiers: BioSample: SAMN09926533; Sample name: Uncultivated Pseudomonas oleovorans SZUA-1518 genome recovered from ERS1370027; SRA: SRS3745264

Organism: Ectopseudomonas oleovorans
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Ectopseudomonas

Package: Microbe; version 1.0

Attributes

isolate	SZUA-1518
isolation source	Mid-Cayman Rise Vent Fluids
collection date	2017-04-15
geographic location	Atlantic Ocean:Mid Cayman Rise
sample type	metagenomic assembly
latitude and longitude	18.375 N 81.7976 W
derived from	This BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: ERS1370027
metagenome source	hydrothermal vent metagenome
assembly_method_and_version	MEGAHIT v1.1.2
completeness_estimated	98.3
contamination_estimated	0.36
quality_assessment_method_and_version	CheckM v1.0.7
environmental-sample	true
genome_coverage	47.19
mapping_method_and_version	Bowtie 2 v2.2.8
metagenomic	true

BioProject: PRJNA488180 hydrothermal vent metagenome
Retrieve all samples from this project

Submission: The University of Hong Kong, Zhichao Zhou; 2018-08-28

Accession:: SAMN09926533
ID:: 9926533

BioProject SRA Nucleotide

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