U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Syntrophaceae bacterium UBA1163 genome recovered from SRX461673

Identifiers
BioSample: SAMN06454634; Sample name: Syntrophaceae bacterium UBA1163; SRA: SRS2033889
Organism
Syntrophaceae bacterium UBA1163
cellular organisms; Bacteria; Pseudomonadati; Thermodesulfobacteriota; Syntrophia; Syntrophales; Syntrophaceae; unclassified Syntrophaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA: Marcell Experimental Forest
isolateUBA1163
isolation sourcesoil
metagenome sourcesoil metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX461673 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated93.06%
contamination_estimated2.90%
environmental_sampletrue
genome_coverage12.47
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the soil metagenome reads: SRR1157607,SRR1157608.
Description

Uncultivated genome recovered from an assembly of the SRX461673 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454634
ID:
6454634

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center