U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MAG: Cyclobacteriaceae 2017-08-07 WE2

Identifiers
BioSample: SAMN45874380; Sample name: Cyclobacteriaceae samp_2073_metabat2_70
Organism
Cyclobacteriaceae bacterium
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae
Package
MIMAG: metagenome-assembled genome, water; version 6.0
Attributes
size-fraction upper threshold3 μm
temperature23.9 °C
conductivity263.4 μS/cm
turbidity6.03 NTU
chlorophyll21.52 μg/L
soluble reactive phosphorus3.38 μg/L
particulate organic nitrogen0.25 mg/L
particulate organic carbon1.63 mg/L
dissolved organic carbon3.19 mg/L
suspended particulate matter5.36 mg/L
wind speed3.16 knots
collection date2017-08-07T17:19:00Z
depth1 m
broad-scale environmental contextEutrophic Lake [ENVO:01000548]
local-scale environmental contextLake [ENVO:00000020]
environmental mediumwater [ENVO:00002006]
geographic locationUSA: Lake Erie
latitude and longitude41.7633 N 83.3303 W
isolatesamp_2073_metabat2_70
isolation sourcelake water
derived fromSAMN45060156
sample typemetagenomic assembly
metagenome sourcefreshwater metagenome
GAZ_idGAZ:00003931
NOAA_SiteWE2
keywordsHABs
depth_at_sampling_location5.69 m
secchi1.3 m
part_microcyst6.53 μg/L
diss_microcyst0.19 μg/L
ext_phyco11.26 μg/L
tot_phos44.87 μg/L
diss_phosp7.65 μg/L
ammonia49.39 μg/L
urea10.15 µg/L
suspend_vol_solid1.66 mg/L
attenuation2.1 m-1
transmission59.2 %
par1171 μE/m2/s
skysunny
wave_height0.46 ft
Notes7222-SRC-33
nitrate_nitrite1.013 mg/L
col_dom1.071 µg/L
SampleIDsamp_2073
Completeness (%)97.77
Contamination (%)1.59
Strain heterogeneity (%)0
metagenomic1
environmental-sample1
Description

Keywords: GSC:MIxS;MIMAG:6.0

BioProject
PRJNA1190886
Retrieve all samples from this project

Submission
University of Michigan, Paul Den Uyl; 2024-12-17
Accession:
SAMN45874380
ID:
45874380

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center