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Gut metagenome of Sus scrofa: cecal

Identifiers
BioSample: SAMN35298054; Sample name: FarmE_UTT; SRA: SRS17773174
Organism
gut metagenome
unclassified entries; unclassified sequences; metagenomes; organismal metagenomes
Package
MIMS: metagenome/environmental, agriculture; version 6.0
Attributes
chemical administrationnot collected
collection date2021-07
broad-scale environmental contextenvironmental system [ENVO:01000254]
local-scale environmental contextexcreta [ENVO:02000022]
environmental mediumpig manure [ENVO:00003860]
food sourcefinisher pig [FOODON:00003371]
geographic locationThailand:Uttaradit
hostSus scrofa
host age120 days old
host common namepig
host genotypenot collected
host heightnot collected
host lengthnot collected
host life stagefinisher
host phenotypenot collected
host taxonomy ID9823 (9823)
host total mass2300 pigs
latitude and longitude17.706141 N 100.198078 E
microbial biomassnot collected
microbial biomass methodnot collected
pathogenicitynot collected
sample storage durationJul-2021 to to Jan-2023
sample storage locationLampang,Thailand
sieving1 caecum/sample
soil typenot collected
soil type methodnot collected
storage conditionsstored at -30 C for 5 months
temperature37 C
Description

Keywords: GSC:MIxS;MIMS:6.0

BioProject
PRJNA937456 Commercial swine cecum
Retrieve all samples from this project

Submission
University of Bath, Ben Pascoe; 2023-05-21
Accession:
SAMN35298054
ID:
35298054

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