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Microbe sample from Dehalococcoidia bacterium

Identifiers
BioSample: SAMN10967686; Sample name: Uncultivated Dehalococcoidia bacterium UWMA-0354 genome recovered from SRR3577362; SRA: SRS4404842
Organism
Dehalococcoidia bacterium
cellular organisms; Bacteria; Bacillati; Chloroflexota; Dehalococcoidia; unclassified Dehalococcoidia
Package
Microbe; version 1.0
Attributes
isolateUWMA-0354
isolation sourceGuaymas Basin Hydrothermal plume metagenome
collection date2004-07-11
geographic locationUSA:Guaymas Basin
sample typemetagenomic assembly
latitude and longitude27.51583333 N 111.425 W
derived fromMetagenome-assembled genome binned from sequencing reads available in SRR3577362
metagenome sourcemarine metagenome
assembly_method_and_versionSPAdes v3.12.0
completeness_estimated88.36
contamination_estimated8.02
quality_assessment_method_and_versionCheckM v1.0.11
environmental-sampletrue
genome_coverage0.8
mapping_method_and_versionBowtie 2 v2.3.4.1
metagenomictrue
BioProject
PRJNA522654 hydrothermal vent metagenome
Retrieve all samples from this project

Submission
University of Wisconsin-Madison, Zhichao Zhou; 2019-02-19
Accession:
SAMN10967686
ID:
10967686

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