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MIMARKS Specimen sample from uncultured crAssphage

Identifiers
BioSample: SAMN10659283; Sample name: Uncultured crAssphage amplicon recovered from SRR540788
Organism
uncultured crAssphage
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Crassvirales; unclassified Crassvirales
Package
MIMARKS: specimen; version 6.0
Attributes
collection datemissing
broad-scale environmental contextmissing
local-scale environmental contextmissing
environmental mediummissing
geographic locationmissing
latitude and longitudemissing
analyte typeG_DNA_Anterior nares
tissueG_DNA_Anterior nares
cultivarnot applicable
ecotypenot applicable
gap subject id241712
host sexfemale
isolatenot applicable
isolation and growth conditionnot applicable
molecular data typeMetagenome (NGS)
strainnot applicable
study designControl Set
study nameHMP Core Microbiome Sampling Protocol A (HMP-A)
extraction_methodSequence was extracted from bioproject SRR540788 using Gretel version 0.08.
Description

Keywords: GSC:MIxS;MIMARKS:6.0

Alternative identifiers
biospecimen repositoryEMMES_HMP
biospecimen repository sample id700119580
submitted sample id700119580
submitted subject id158944319
submitter handleEMMES_HMP
BioProjects
PRJNA510571 uncultured crAssphage
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PRJNA74933 Homo sapiens
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PRJNA50563 human metagenome
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PRJNA48489 Human Microbiome Project (HMP) 16S rRNA Gene Diversity
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PRJNA48479 human metagenome
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PRJNA48477 human metagenome
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PRJNA48475 human metagenome
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PRJNA48335 human metagenome
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PRJNA48333 human metagenome
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PRJNA43017 Human Microbiome Project (HMP) Metagenome Projects
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Submission
San Diego State University, Robert Edwards; 2018-12-27
Accession:
SAMN10659283
ID:
10659283

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