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Organizing biological data

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Select item 11954921.

The antiquity of treponemal disease in the Americas as revealed through ancient genomic analyses.

Ancient treponemal genomes from the Americas

: Project data type: Other

Scope:: Monoisolate

Max Planck Institute for Evolutionary Anthropology

Accession:: PRJEB62879
ID:: 1195492

Select item 11552002.

T. pallidum sequencing from gastric and colon biopsies from an HIV-infected patient

: Project data type: Raw sequence reads

Scope:: Multispecies

University of Washington Laboratory Medicine

Accession:: PRJNA1155200
ID:: 1155200

Select item 11423323.

Treponema_pallidum_strain_diversity_in_Africa_and_Asia___MAGUS

: Project data type: Other

Scope:: Monoisolate

Wellcome Sanger Institute

Accession:: PRJEB63120
ID:: 1142332

Select item 11347124.

Treponema pallidum subsp. pallidum

Transgenic Treponema pallidum subsp. pallidum expressing GFP-KanR cassette

Taxonomy:: Treponema pallidum subsp. pallidum (syphilis treponeme)

: Project data type: Raw sequence reads

Scope:: Multiisolate

University of North Carolina at Chapel Hill

Accession:: PRJNA1134712
ID:: 1134712

Select item 11217335.

Whole_genome_and_transcriptome_sequencing_of_in_vitro_cultured_Treponema_pallidum

: Project data type: Other

Scope:: Monoisolate

Wellcome Sanger Institute

Accession:: PRJEB49526
ID:: 1121733

Select item 11185806.

Genomic_drivers_of_syphilis_diversity_in_South_Africa

: Project data type: Other

Scope:: Monoisolate

Wellcome Sanger Institute

Accession:: PRJEB60271
ID:: 1118580

Select item 11136857.

In vitro doxycycline treatment of T. pallidum

: Project data type: Raw sequence reads

Scope:: Multispecies

University of Washington Laboratory Medicine

Accession:: PRJNA1113685
ID:: 1113685

Select item 10885098.

GFP T pallidum

: Project data type: Raw sequence reads

Scope:: Multispecies

University of Washington Laboratory Medicine

Accession:: PRJNA1088509
ID:: 1088509

Select item 10793139.

Treponema pallidum subsp. pallidum str. Nichols

Causative agent of syphilis

Taxonomy:: Treponema pallidum subsp. pallidum str. Nichols

: Project data type: RefSeq Genome

Scope:: Multiisolate

NCBI

Accession:: PRJNA1079313
ID:: 1079313

Select item 106261210.

Treponema pallidum subsp. pertenue

Treponema pallidum subsp. pertenue of non-human primate origin raw sequence reads

Taxonomy:: Treponema pallidum subsp. pertenue (yaws treponeme)

: Project data type: Raw sequence reads

Scope:: Multiisolate

Masaryk University

Accession:: PRJNA1062612
ID:: 1062612

Select item 103875411.

Azithromycin resistance in Treponema pallidum

: Project data type: Raw sequence reads

Scope:: Multispecies

University of Washington Laboratory Medicine

Accession:: PRJNA1038754
ID:: 1038754

Select item 102746312.

Whole genome sequencing of T. pallidum from linezolid clinical trial

: Project data type: Raw sequence reads

Scope:: Multispecies

University of Washington Laboratory Medicine

Accession:: PRJNA1027463
ID:: 1027463

Select item 100085613.

Dual_RNA_seq_of_TPA___pilot

: Project data type: Other

Scope:: Monoisolate

Wellcome Sanger Institute

Accession:: PRJEB50419
ID:: 1000856

Select item 98349514.

: Project data type: Raw sequence reads

Scope:: Multispecies

Beijing macroµ-test Bio-Tech Co.Ltd

Accession:: PRJNA983495
ID:: 983495

Select item 97407015.

T pallidum sequencing from USA

: Project data type: Raw sequence reads

Scope:: Multispecies

University of Washington Laboratory Medicine

Accession:: PRJNA974070
ID:: 974070

Select item 96203716.

Treponema pallidum subsp. pallidum strain:NYMC01

Treponema pallidum subsp. pallidum strain:NYMC01 Genome sequencing

Organism:: Treponema pallidum subsp. pallidum

Taxonomy:: Treponema pallidum subsp. pallidum (syphilis treponeme)

: Project data type: Genome sequencing

Scope:: Monoisolate

University of TX McGovern Medical School

Accession:: PRJNA962037
ID:: 962037

Select item 96130417.

Treponema pallidum

Treponema pallidum Genome sequencing and assembly

Taxonomy:: Treponema pallidum

: Project data type: Genome sequencing and assembly

Scope:: Multiisolate

University of Washington

Accession:: PRJNA961304
ID:: 961304

Select item 94351118.

Longitudinal variations in the tprK gene of Treponema pallidum in an Amoy strain-infected rabbit model

: Project data type: Raw sequence reads

Scope:: Multispecies

Xiamen University

Accession:: PRJNA943511
ID:: 943511

Select item 91299519.

Sequencing Treponema genomes from ancient FFPE samples

: Project data type: Genome sequencing

Scope:: Multispecies

University of Strasbourg

Accession:: PRJNA912995
ID:: 912995

Select item 91118020.

Whole genome sequencing of T pallidum from lymph node

: Project data type: Raw sequence reads

Scope:: Multispecies

University of Washington Laboratory Medicine

Accession:: PRJNA911180
ID:: 911180

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