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Items: 19

1.

Thermococcus kodakarensis

Thermococcus kodakarensis TK2045 project, whole genome sequence reads

Taxonomy:
Thermococcus kodakarensis
Project data type: Raw sequence reads
Scope:
Monoisolate
Archaeal Epitranscriptomics Consortium
Accession:
PRJNA1154289
ID:
1154289

2.

Thermococcus kodakarensis

Thermococcus kodakarensis strains deleted for RNA modifying enzymes, WGS reads

Taxonomy:
Thermococcus kodakarensis
Project data type: Raw sequence reads
Scope:
Monoisolate
Archaeal Epitranscriptomics Consortium
Accession:
PRJNA1125032
ID:
1125032

3.

Chromosomal domain formation by archaeal SMC, a roadblock protein, and DNA shape [RNA-seq]

Taxonomy:
Thermococcus kodakarensis
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Synthetic Chemistry and Biological Chemistry, Kyoto University
Accession:
PRJNA1111018
ID:
1111018

4.

Chromosomal domain formation by archaeal SMC, a roadblock protein, and DNA shape [ChIP-seq]

Taxonomy:
Thermococcus kodakarensis
Project data type: Epigenomics
Scope:
Multiisolate
Synthetic Chemistry and Biological Chemistry, Kyoto University
Accession:
PRJNA1111013
ID:
1111013

5.

Thermococcus kodakarensis

Tetraether archaeal lipids promote long-term survival in extreme heat

Taxonomy:
Thermococcus kodakarensis
Project data type: Raw sequence reads
Scope:
Monoisolate
Colorado State University
Accession:
PRJNA1022152
ID:
1022152

6.

Thermococcus kodakarensis strain:RLV2

WGS conformation of TFS deletion in Thermococcus kodakarensis

Taxonomy:
Thermococcus kodakarensis
Project data type: Genome sequencing
Scope:
Monoisolate
Colorado State University
Accession:
PRJNA996631
ID:
996631

7.

Thermococcus kodakarensis

Thermococcus kodakarensis bisulfite-sequenced RNA

Taxonomy:
Thermococcus kodakarensis
Project data type: Raw sequence reads
Scope:
Multiisolate
epitranscriptomics consortium
Accession:
PRJNA937301
ID:
937301

8.

Thermococcus kodakarensis strain:TS901

Thermococcus kodakarensis strain:TS901 Genome sequencing

Taxonomy:
Thermococcus kodakarensis
Project data type: Genome sequencing
Scope:
Monoisolate
Colorado State University
Accession:
PRJNA928457
ID:
928457

9.

Thermococcus kodakarensis strain:Isolate 1 | isolate:Isolate 1

TS900 Reference Genome

Taxonomy:
Thermococcus kodakarensis
Project data type: Genome sequencing
Scope:
Monoisolate
Colorado State University
Accession:
PRJNA928455
ID:
928455

10.

Genetic and functional analyses of archaeal ATP-dependent RNA Ligase

Taxonomy:
Thermococcus kodakarensis
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
University of Tsukuba
Accession:
PRJNA856170
ID:
856170

11.

Thermococcus kodakarensis strain:KU216

RNA sequencing on Thermococcus kodakarensis KU216 and DBP1 mutant.

Taxonomy:
Thermococcus kodakarensis
Project data type: Transcriptome or Gene expression
Scope:
Monoisolate
NODAI Genome Research Center, Tokyo University of Agriculture
Accession:
PRJDB7903
ID:
792345

12.

Genetic and functional analysis of archaeal ATP-dependent RNA ligase in ribosomal RNA biogenesis

Taxonomy:
Thermococcus kodakarensis KOD1
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
University of Tsukuba
Accession:
PRJNA776174
ID:
776174

13.

Discovery of novel hyperthermophilic DNA modifying enzymes using a functional genomics screen

Taxonomy:
Thermococcus kodakarensis
Project data type: Transcriptome or Gene expression
Scope:
Monoisolate
Gardner, Molecular Enzymology, New England Biolabs
Accession:
PRJNA754396
ID:
754396

14.

Extended archaeal histone-based chromatin structure regulates global gene expression in Thermococcus kodakarensis

Taxonomy:
Thermococcus kodakarensis
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Colorado State University
Accession:
PRJNA637645
ID:
637645

15.

Thermococcus kodakarensis

Microarray analysis of the hyperthermophilic archaeon Thermococcus kodakarensis grown at lowest growth temperature

Taxonomy:
Thermococcus kodakarensis
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Fujiwara lab., School of Science and Technology, Kwansei-Gakuin University
Accession:
PRJNA292671
ID:
292671

16.

Thermococcus kodakarensis

Microarray analysis of the deletion of transcription regulator SurR in the hyperthermophilic archaeon Thermococcus kodakarensis

Taxonomy:
Thermococcus kodakarensis
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Fujiwara lab., School of Science and Technology, Kwansei-Gakuin University
Accession:
PRJNA292662
ID:
292662

17.

Thermococcus kodakarensis KOD1

Primary transcriptome map of the hyperthermophilic archaeon Thermococcus kodakarensis

Taxonomy:
Thermococcus kodakarensis KOD1
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
John N. Reeve, Microbiology, The Ohio State University
Accession:
PRJNA242777
ID:
242777

18.

Thermococcus kodakarensis KOD1

Thermococcus kodakarensis KOD1 Epigenomics

Taxonomy:
Thermococcus kodakarensis KOD1
Project data type: Epigenomics
Scope:
Multiisolate
School of Biosciences, Cardiff University
Accession:
PRJNA209412
ID:
209412

19.

Thermococcus kodakarensis KOD1

Hyperthermophilic archaeon

Taxonomy:
Thermococcus kodakarensis KOD1
Project data type: Genome sequencing
Scope:
Monoisolate
Kyoto University, Japan
Accession:
PRJNA13213
ID:
13213

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