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Accession: PRJNA982295 ID: 982295

Xanthomonas campestris pv. campestris

Genome sequencing of Xanthomonas campestris pv. campestris

See Genome Information for Xanthomonas campestris
Xanthomonas campestris pv. campestris is a gram-negative bacterium that causes black rot disease in cruciferous plants, including cabbage, cauliflower, and broccoli. More...
AccessionPRJNA982295
Data TypeGenome sequencing
ScopeMultiisolate
OrganismXanthomonas campestris pv. campestris[Taxonomy ID: 340]
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Lysobacterales; Lysobacteraceae; Xanthomonas; Xanthomonas campestris; Xanthomonas campestris pv. campestris
Grants
  • "Xanthomonas plant diseases: mitigating existing, emerging and future threats to UK agriculture" (Grant ID BB/T010916/1, UK Research and Innovation)
SubmissionRegistration date: 10-Jun-2023
University of Exeter
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)42
WGS master38
Genomic DNA4
SRA Experiments49
Protein Sequences16215
Other datasets
BioSample42
Assembly42
Assembly details:
Assembly levelNumber of Assemblies
4
38
42
AssemblyLevelWGSChrsBioSampleStrainTaxonomy
GCA_040194335.2Complete genomeSAMN39785579
WHRI 3834A
GCA_040194035.2Complete genomeSAMN39785596
WHRI 5812
GCA_040193835.2Complete genomeSAMN39785610
WHRI 8955
GCA_040194315.2Complete genomeSAMN39785611
WHRI 8956
GCA_040193215.1ScaffoldJBEFVL000000000
SAMN39785601
WHRI 8516B
GCA_040192715.1ScaffoldJBEFVI000000000
SAMN39785598
WHRI 8506
GCA_040192675.1ScaffoldJBEFUZ000000000
SAMN39785582
WHRI 3845B
GCA_040192315.1ScaffoldJBEFVO000000000
SAMN39785608
WHRI 8827A
GCA_040193535.1ScaffoldJBEFVG000000000
SAMN39785589
WHRI 3976A
GCA_040193635.1ScaffoldJBEFVK000000000
SAMN39785600
WHRI 8516A
GCA_040193615.1ScaffoldJBEFVM000000000
SAMN39785605
WHRI 8824A
GCA_040193575.1ScaffoldJBEFVJ000000000
SAMN39785599
WHRI 8514
GCA_040193715.1ScaffoldJBEFUD000000000
SAMN39785594
WHRI 5490
GCA_040193695.1ScaffoldJBEFVF000000000
SAMN39785588
WHRI 3972A
GCA_040193675.1ScaffoldJBEFVN000000000
SAMN39785607
WHRI 8826A
GCA_040194355.1ScaffoldJBEFUN000000000
SAMN39785609
WHRI 8953
GCA_040194295.1ScaffoldJBEFUM000000000
SAMN39785606
WHRI 8825
GCA_040194265.1ScaffoldJBEFVB000000000
SAMN39785584
WHRI 3852B
GCA_040194255.1ScaffoldJBEFUX000000000
SAMN39785580
WHRI 3835A
GCA_040194235.1ScaffoldJBEFUY000000000
SAMN39785581
WHRI 3844B
GCA_040194215.1ScaffoldJBEFVC000000000
SAMN39785585
WHRI 3874
GCA_040194195.1ScaffoldJBEFVE000000000
SAMN39785587
WHRI 3962
GCA_040194175.1ScaffoldJBEFVD000000000
SAMN39785586
WHRI 3961
GCA_040194155.1ScaffoldJBEFUU000000000
SAMN39785577
WHRI 3831A
GCA_040194135.1ScaffoldJBEFVH000000000
SAMN39785597
WHRI 6190
GCA_040194115.1ScaffoldJBEFUB000000000
SAMN39785592
WHRI 5486
GCA_040194095.1ScaffoldJBEFUA000000000
SAMN39785591
WHRI 5482
GCA_040194075.1ScaffoldJBEFUE000000000
SAMN39785595
WHRI 5659
GCA_040194055.1ScaffoldJBEFUG000000000
SAMN39785612
WHRI 7758
GCA_040194015.1ScaffoldJBEFUC000000000
SAMN39785593
WHRI 5489
GCA_040193995.1ScaffoldJBEFUL000000000
SAMN39785604
WHRI 8823
GCA_040193975.1ScaffoldJBEFTZ000000000
SAMN39785590
WHRI 3978
GCA_040193955.1ScaffoldJBEFUQ000000000
SAMN39785573
WHRI 10071A
GCA_040193935.1ScaffoldJBEFUK000000000
SAMN39785603
WHRI 8821
GCA_040193915.1ScaffoldJBEFUH000000000
SAMN39785613
WHRI 8339
GCA_040193895.1ScaffoldJBEFUS000000000
SAMN39785575
WHRI 10072A
GCA_040193875.1ScaffoldJBEFUR000000000
SAMN39785574
WHRI 10071B
GCA_040193845.1ScaffoldJBEFUI000000000
SAMN39785614
WHRI 8507
GCA_040193815.1ScaffoldJBEFUT000000000
SAMN39785576
WHRI 10072B
GCA_040193795.1ScaffoldJBEFUJ000000000
SAMN39785602
WHRI 8815
GCA_040193775.1ScaffoldJBEFUV000000000
SAMN39785578
WHRI 3833A
GCA_040193755.1ScaffoldJBEFVA000000000
SAMN39785583
WHRI 3846B
SRA Data Details
ParameterValue
Data volume, Gbases41
Data volume, Mbytes17234

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