Enterobacter (ID 721536) - BioProject

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Accession: PRJNA721536 ID: 721536

Enterobacter

Study on blood-borne Carbapenem-resistant Enterobacter cloacae complex isolated from sepsis patients admitted to ICU departments of tertiary care hospitals at Kolkata,India.

Carbapenem-resistant Enterobacter clocae complex isolated from blood of sepsis patients admitted to ICU departments of tertiary care hospitals at Kolkata.

Accession	PRJNA721536
Data Type	Genome sequencing and assembly
Scope	Multispecies
Organism	Enterobacter[Taxonomy ID: 547] Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Enterobacter
Publications	Halder G et al., "Whole genome sequence-based molecular characterization of blood isolates of carbapenem-resistant Enterobacter cloacae complex from ICU patients in Kolkata, India, during 2017-2022: emergence of phylogenetically heterogeneous Enterobacter hormaechei subsp. xiangfangensis.", Microbiol Spectr, 2024 Apr 2;12(4):e0352923
Submission	Registration date: 21-Feb-2023 ICMR-National Institute of Cholera and Enteric Diseases
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	55
WGS master	50
Genomic DNA	5
SRA Experiments	56
Protein Sequences	9225
Publications
PubMed	1
PMC	1
Other datasets
BioSample	52
Assembly	52

Assembly details:

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Assembly level

Number of Assemblies

2
2
48
52

Assembly	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_033598895.1	JAVLSI000000000		SAMN37334426	MDCL 101	Enterobacter cloacae subsp. cloacae
GCA_031611435.1	JAHAVA000000000		SAMN19068041	SD25	Enterobacter cloacae subsp. cloacae
GCA_031611375.1	JAHAUZ000000000		SAMN19033012	RT1459:NRCR12	Enterobacter cloacae subsp. cloacae
GCA_031610975.1	JAQSHN000000000		SAMN33179878	MDCL 83	Enterobacter cloacae subsp. cloacae
GCA_031610775.1	JAQIIM000000000		SAMN32638362	U3808-NRCR22	Enterobacter cloacae subsp. dissolvens
GCA_031610545.1	JAPYYO000000000		SAMN32360787	CNCI 63	Enterobacter cloacae subsp. cloacae
GCA_031610355.1	JAUITE000000000		SAMN36267074	CNCI 62	Enterobacter cloacae subsp. cloacae
GCA_031610135.1	JAUITC000000000		SAMN36266797	PEER 908	Enterobacter hormaechei subsp. xiangfangensis
GCA_031609995.1	JAUDFA000000000		SAMN35847739	CNCI 53	Enterobacter hormaechei subsp. hoffmannii
GCA_031610005.1	JARULP000000000		SAMN34041711	PEER 294	Enterobacter hormaechei subsp. xiangfangensis
GCA_031609945.1	JAUDFD000000000		SAMN35847863	22:NRCR 6	Enterobacter hormaechei subsp. xiangfangensis
GCA_031609955.1	JAUDFC000000000		SAMN35847827	MDCL 82	Enterobacter hormaechei subsp. xiangfangensis
GCA_031609935.1	JAUDFB000000000		SAMN35847764	PEER 379	Enterobacter hormaechei subsp. xiangfangensis
GCA_031610335.1	JAUITD000000000		SAMN36267071	MDCL 103	Enterobacter hormaechei subsp. xiangfangensis
GCA_031610435.1	JAPWIZ000000000		SAMN32299998	APCR 75	Enterobacter hormaechei subsp. xiangfangensis
GCA_031610385.1	JAVCAQ000000000		SAMN36942529	MDCL 102	Enterobacter hormaechei subsp. xiangfangensis
GCA_031610375.1	JAQGED000000000		SAMN32340369	CNCI 199	Enterobacter hormaechei subsp. xiangfangensis
GCA_031610195.1	JAUITB000000000		SAMN36266794	PEER 619	Enterobacter hormaechei subsp. steigerwaltii
GCA_031610225.1	JAUITA000000000		SAMN36266793	PEER 580	Enterobacter hormaechei subsp. steigerwaltii
GCA_031610735.1	JAQHXY000000000		SAMN32638361	RGCR 38	Enterobacter hormaechei subsp. xiangfangensis
GCA_031610655.1	JAQGER000000000		SAMN32638338	PEER 1096	Enterobacter hormaechei subsp. xiangfangensis
GCA_031610665.1	JAQHXX000000000		SAMN32638346	CNCI 86	Enterobacter hormaechei subsp. xiangfangensis
GCA_031610615.1	JAPZBA000000000		SAMN32360973	CNCI 72	Enterobacter hormaechei subsp. steigerwaltii
GCA_031610535.1	JAPZPX000000000		SAMN32340561	CNCI 200	Enterobacter hormaechei subsp. xiangfangensis
GCA_031610935.1	JAQSEH000000000		SAMN33179877	CNCI 250	Enterobacter hormaechei subsp. xiangfangensis
GCA_031610865.1	JAQSEG000000000		SAMN33179858	FTCR 438	Enterobacter hormaechei subsp. xiangfangensis
GCA_031610855.1	JAQSEF000000000		SAMN33179817	DECR 6	Enterobacter hormaechei subsp. xiangfangensis
GCA_031610795.1	JAQIIN000000000		SAMN32638390	MDCL 45	Enterobacter hormaechei subsp. xiangfangensis
GCA_031611395.1	JAGYXN000000000		SAMN19009187	4661:NRCR8	Enterobacter hormaechei subsp. xiangfangensis
GCA_031611215.1	JARQZG000000000		SAMN33796025	APCR 84	Enterobacter hormaechei subsp. xiangfangensis
GCA_031611175.1	JARDRV000000000		SAMN33196670	PEER 384	Enterobacter hormaechei subsp. xiangfangensis
GCA_031611145.1	JARDRU000000000		SAMN33196241	PEER 101	Enterobacter hormaechei subsp. steigerwaltii
GCA_031611075.1	JARDRT000000000		SAMN33195955	PEER 487	Enterobacter hormaechei subsp. steigerwaltii
GCA_031611005.1	JARDRS000000000		SAMN33195837	PEER 323	Enterobacter hormaechei subsp. steigerwaltii
GCA_031610995.1	JAQSEI000000000		SAMN33180011	PEER 367	Enterobacter hormaechei subsp. xiangfangensis
GCA_031611345.1	JAGYUY000000000		SAMN19006859	BT844:NRCR7	Enterobacter hormaechei subsp. xiangfangensis
GCA_031611335.1	JAGRZM000000000		SAMN18744515	PLCR20	Enterobacter hormaechei subsp. xiangfangensis
GCA_031611295.1	JAGQAU000000000		SAMN18720220	PLCR15	Enterobacter hormaechei subsp. xiangfangensis
GCA_031611415.1	JAHAML000000000		SAMN19079074	PLCR 8	Enterobacter hormaechei subsp. xiangfangensis
GCA_031611535.1	JALGQD000000000		SAMN26792407	CNCI 3	Enterobacter hormaechei subsp. xiangfangensis
GCA_031611475.1	JAIUJF000000000		SAMN21469474	P955 : NRCR 5	Enterobacter hormaechei subsp. xiangfangensis
GCA_031611455.1	JAIULB000000000		SAMN21453079	APCR103	Enterobacter hormaechei subsp. steigerwaltii
GCA_031588435.1	JAUISZ000000000		SAMN36266791	PEER 433	Enterobacter hormaechei subsp. xiangfangensis
GCA_031588445.1	JARFNI000000000		SAMN33451684	CNCI 146	Enterobacter hormaechei subsp. steigerwaltii
GCA_031588415.1	JARDRR000000000		SAMN33195650	PEER 488	Enterobacter hormaechei subsp. xiangfangensis
GCA_028752775.1		3	SAMN21522362	MDCL 3	Enterobacter hormaechei subsp. xiangfangensis
GCA_030292525.1	JARDAH000000000		SAMN33334961	PLCR 21	Enterobacter hormaechei subsp. xiangfangensis
GCA_030062075.1		2	SAMN26810699	CNCI 7	Enterobacter hormaechei subsp. xiangfangensis
GCA_031611495.1	JAIULC000000000		SAMN21453080	BT202:NRCR2	Enterobacter kobei
GCA_031611235.1	JAGQAV000000000		SAMN18720820	24M	Enterobacter roggenkampii
GCA_031611515.1	JALLIR000000000		SAMN27594436	PEER684	Enterobacter sichuanensis
GCA_031588375.1	JAQGEC000000000		SAMN32340148	CNCI147	Pseudenterobacter timonensis

SRA Data Details

Parameter	Value
Data volume, Gbases	120
Data volume, Mbytes	43713

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Enterobacter

Study on blood-borne Carbapenem-resistant Enterobacter cloacae complex isolated from sepsis patients admitted to ICU departments of tertiary care hospitals at Kolkata,India.

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