Mycobacterium (ID 270004) - BioProject

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Accession: PRJNA270004 ID: 270004

Mycobacterium

The methylome of Mycobacterium tuberculosis complex (MTBC)

The methylome of twelve Mycobacterium tuberculosis complex (MTBC) strains were determined using Pacbio single-molecule real-time sequencing technology.

Accession	PRJNA270004
Scope	Multispecies
Organism	Mycobacterium[Taxonomy ID: 1763] Bacteria; Bacillati; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae; Mycobacterium
Publications	Zhu L et al., "Precision methylome characterization of Mycobacterium tuberculosis complex (MTBC) using PacBio single-molecule real-time (SMRT) technology.", Nucleic Acids Res, 2016 Jan 29;44(2):730-43
Submission	Registration date: 2-Feb-2016 Beijing Institute of Genomics,Chinese Academy of Sciences
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (Genomic DNA)	12
SRA Experiments	52
Protein Sequences	52471
Publications
PubMed	1
PMC	1
Other datasets
BioSample	25
Assembly	12
Supplementary data
Base modification	12

Assembly details:

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Assembly level

Number of Assemblies

Complete genome

Total

12
12

Assembly	Chrs	BioSample	Strain	Taxonomy
GCA_001545055.1	1	SAMN03257097	26105	Mycobacterium tuberculosis
GCA_001545015.1	1	SAMN03257096	22103	Mycobacterium tuberculosis
GCA_001544775.1	1	SAMN03257089	30	Mycobacterium tuberculosis variant bovis
GCA_001544815.1	1	SAMN03257090	12	Mycobacterium tuberculosis variant microti
GCA_001544735.1	1	SAMN03253093	26	Mycobacterium tuberculosis variant bovis BCG
GCA_001544985.1	1	SAMN03257095	37004	Mycobacterium tuberculosis
GCA_001544955.1	1	SAMN03257094	22115	Mycobacterium tuberculosis
GCA_001544935.1	1	SAMN03257093	2279	Mycobacterium tuberculosis
GCA_001544895.1	1	SAMN03257092	2242	Mycobacterium tuberculosis
GCA_001544855.1	1	SAMN03257091	25	Mycobacterium tuberculosis variant africanum
GCA_001544675.1	1	SAMN03253054	F1	Mycobacterium tuberculosis
GCA_001544705.1	1	SAMN03253058	F28	Mycobacterium tuberculosis

SRA Data Details

Parameter	Value
Data volume, Gbases	62
Data volume, Tbytes	0.12

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Mycobacterium

The methylome of Mycobacterium tuberculosis complex (MTBC)

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