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Accession: PRJNA475137 ID: 475137

Rhizopus oryzae

Rhizopus oryzae Genome sequencing and assembly

Whole genome sequencing for clinical and environmental Rhizopus isolates.
AccessionPRJNA475137
Data TypeGenome sequencing and assembly
ScopeMultispecies
PublicationsNguyen MH et al., "Genetic diversity of clinical and environmental Mucorales isolates obtained from an investigation of mucormycosis cases among solid organ transplant recipients.", Microb Genom, 2020 Dec;6(12)
SubmissionRegistration date: 7-Jun-2018
J Craig Venter Institute
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)387220
WGS master57
SRA Experiments57
Protein Sequences895066
Publications
PubMed1
PMC1
Other datasets
BioSample114
Assembly57
Assembly details:
Assembly levelNumber of Assemblies
57
57
AssemblyLevelWGSChrsBioSampleStrainTaxonomy
GCA_011801725.2ScaffoldJAANQX000000000SAMN14162347
GL30
GCA_011801645.2ScaffoldJAANRB000000000SAMN14162328
GL49
GCA_011801705.2ScaffoldJAANQY000000000SAMN14162346
GL2
GCA_011801815.2ScaffoldJAANQU000000000SAMN14162350
GL17
GCA_011800955.2ScaffoldJAANRM000000000SAMN14162314
GL40
GCA_011800985.2ScaffoldJAANRL000000000SAMN14162315
GL53
GCA_011801785.2ScaffoldJAANQR000000000SAMN14162353
GL10
GCA_011801335.2ScaffoldJAANRP000000000SAMN14162311
GL22
GCA_011801055.2ScaffoldJAANRO000000000SAMN14162312
GL31
GCA_011801035.2ScaffoldJAANRN000000000SAMN14162313
GL38
GCA_011801385.2ScaffoldJAANRR000000000SAMN14162308
GL29
GCA_011801305.2ScaffoldJAANRS000000000SAMN14162307
GL46
GCA_011801505.2ScaffoldJAANRU000000000SAMN14162305
GL44
GCA_011801605.2ScaffoldJAANRT000000000SAMN14162306
GL56
GCA_011801555.2ScaffoldJAANRX000000000SAMN14162302
GL52
GCA_011801575.2ScaffoldJAANRW000000000SAMN14162303
GL34
GCA_011801675.2ScaffoldJAANQW000000000SAMN14162348
GL26
GCA_011951285.2ScaffoldJAANRG000000000SAMN14162320
GL42
GCA_011950985.2ScaffoldJAANRF000000000SAMN14162321
GL43
GCA_011952175.2ScaffoldJAANRK000000000SAMN14162316
GL32
GCA_011952145.2ScaffoldJAANRJ000000000SAMN14162317
GL37
GCA_011952115.2ScaffoldJAANRI000000000SAMN14162318
GL7
GCA_011952045.2ScaffoldJAANRH000000000SAMN14162319
GL6
GCA_011951295.2ScaffoldJAANRC000000000SAMN14162327
GL3
GCA_011950945.2ScaffoldJAANRD000000000SAMN14162326
GL41
GCA_011763645.1ScaffoldJAASGZ000000000
SAMN14162329
GL39
GCA_011763875.1ScaffoldJAANIZ000000000
SAMN14162332
GL20
GCA_011763775.1ScaffoldJAANIT000000000
SAMN14162338
GL16
GCA_011764265.1ScaffoldJAANRE000000000
SAMN14162322
GL5
GCA_011764225.1ScaffoldJAANRQ000000000
SAMN14162309
GL4
GCA_011764185.1ScaffoldJAANRA000000000
SAMN14162344
GL21
GCA_011764125.1ScaffoldJAANQV000000000
SAMN14162349
GL8
GCA_011764055.1ScaffoldJAANQS000000000
SAMN14162352
GL1
GCA_011764025.1ScaffoldJAANQT000000000
SAMN14162351
GL11
GCA_011763995.1ScaffoldJAANJE000000000
SAMN14162310
GL9
GCA_011763975.1ScaffoldJAANJF000000000
SAMN14162323
GL48
GCA_011763955.1ScaffoldJAANJD000000000
SAMN14162324
GL36
GCA_011763935.1ScaffoldJAANJC000000000
SAMN14162325
GL60
GCA_011801495.1ScaffoldJAANRV000000000SAMN14162304
GL45
GCA_011763915.1ScaffoldJAANJB000000000
SAMN14162330
GL54
GCA_011764145.1ScaffoldJAANQZ000000000
SAMN14162345
GL13
GCA_011763735.1ScaffoldJAANIS000000000
SAMN14162339
GL23
GCA_011763715.1ScaffoldJAANIR000000000
SAMN14162340
GL12
GCA_011763695.1ScaffoldJAANIQ000000000
SAMN14162341
GL14
GCA_011763855.1ScaffoldJAANJA000000000
SAMN14162331
GL51
GCA_011763835.1ScaffoldJAANIX000000000
SAMN14162334
GL55
GCA_011763815.1ScaffoldJAANIU000000000
SAMN14162337
GL24
GCA_011763895.1ScaffoldJAANIY000000000
SAMN14162333
GL25
GCA_011763795.1ScaffoldJAANIV000000000
SAMN14162336
GL50
GCA_011763755.1ScaffoldJAANIW000000000
SAMN14162335
GL62
GCA_011763605.1ScaffoldJAANIO000000000
SAMN14162343
GL27
GCA_011763585.1ScaffoldJAANIP000000000
SAMN14162342
GL15
GCA_011763565.1ScaffoldJAANIN000000000
SAMN14162354
GL28
GCA_011763475.1ScaffoldJAANIM000000000
SAMN14162356
GL61
GCA_011762635.1ScaffoldJAANIK000000000
SAMN14162358
GL58
GCA_011762625.1ScaffoldJAANIL000000000
SAMN14162357
GL35
GCA_011764045.1ScaffoldJAANQQ000000000
SAMN14162355
GL19
SRA Data Details
ParameterValue
Data volume, Gbases240
Data volume, Tbytes0.10

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