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Links from Protein

Accession: PRJNA615288 ID: 615288

Multidrug-resistant Salmonella Indiana, Typhimurium, and Enteritidis isolates from Shanghai, China sequenced using MinION and MiSeq

Multidrug-resistant Salmonella Indiana, Typhimurium, and Enteritidis isolates from Shanghai, China were sequenced using MinION and MiSeq.
AccessionPRJNA615288
Data TypeRaw sequence reads
ScopeMultispecies
Publications
  • Published online: Chen Z et al., "Genomic analyses of multidrug-resistant Salmonella Indiana, Typhimurium, and Enteritidis isolates using MinION and MiSeq sequencing technologies", PLOS ONE, 2020;15(7)
SubmissionRegistration date: 25-Mar-2020
University of Maryland
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (Genomic DNA)80
SRA Experiments50
Protein Sequences116166
Other datasets
BioSample25
Assembly25
Assembly details:
Assembly levelNumber of Assemblies
25
25
AssemblyLevelChrsBioSampleStrainTaxonomy
GCA_012054045.1Complete genomeSAMN14450152
SI85
GCA_012053905.1Complete genomeSAMN14450151
SI67
GCA_012053725.1Complete genomeSAMN14450150
SI43
GCA_012053525.1Complete genomeSAMN14450153
SI96
GCA_012053325.1Complete genomeSAMN14450155
SI108
GCA_012053145.1Complete genomeSAMN14450156
SI111
GCA_012052965.1Complete genomeSAMN14450158
SI170
GCA_012052805.1Complete genomeSAMN14450157
SI115
GCA_012052605.1Complete genomeSAMN14450154
SI102
GCA_012052445.1Complete genomeSAMN14450159
SI173
GCA_012052225.1Complete genomeSAMN14450161
ST45
GCA_012052085.1Complete genomeSAMN14450160
SI174
GCA_012051825.1Complete genomeSAMN14450164
ST56
GCA_012051625.1Complete genomeSAMN14450165
ST90
GCA_012051385.1Complete genomeSAMN14450166
ST101
GCA_012051245.1Complete genomeSAMN14450167
ST106
GCA_012051085.1Complete genomeSAMN14450168
ST113
GCA_012050905.1Complete genomeSAMN14450169
SE74
GCA_012050745.1Complete genomeSAMN14450170
SE81
GCA_012050525.1Complete genomeSAMN14450172
SE104
GCA_012050385.1Complete genomeSAMN14450171
SE95
GCA_012050205.1Complete genomeSAMN14450173
SE109
GCA_012050025.1Complete genomeSAMN14450162
ST46
GCA_012049805.1Complete genomeSAMN14450174
SE124
GCA_012049605.1Complete genomeSAMN14450163
ST53
SRA Data Details
ParameterValue
Data volume, Gbases11
Data volume, Mbytes7687

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