marine sediment metagenome (ID 418890) - BioProject

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Accession: PRJNA418890 ID: 418890

marine sediment metagenome

Metagenomic sequencing from Guaymas Basin Metagenome

Genomic reconstruction of ANME and Bathyarchaeota genomes from Guaymas Basin sediment

Accession	PRJNA418890
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	marine sediment metagenome[Taxonomy ID: 412755] unclassified sequences; metagenomes; ecological metagenomes; marine sediment metagenome
Publications	Wang Y et al., "Diverse anaerobic methane- and multi-carbon alkane-metabolizing archaea coexist and show activity in Guaymas Basin hydrothermal sediment.", Environ Microbiol, 2019 Apr;21(4):1344-1355
Submission	Registration date: 1-Oct-2018 Shanghai Jiao Tong University
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	2324
WGS master	20
Protein Sequences	25403
Publications
PubMed	1
Other datasets
BioSample	21
Assembly	20

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Contig

Total

16
4
20

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_003601535.1	PIXW00000000	SAMN08103063	WYZ-LMO14	ANME-2 cluster archaeon
GCA_003604315.1	PIYK00000000	SAMN08103049	M10_bin185	Candidatus Bathyarchaeota archaeon
GCA_003601875.1	PIYF00000000	SAMN08103054	M10_bin214	Candidatus Bathyarchaeota archaeon
GCA_003601845.1	PIYC00000000	SAMN08103057	M10_bin26	Candidatus Bathyarchaeota archaeon
GCA_003601885.1	PIYM00000000	SAMN08103047	M10_bin143	Candidatus Bathyarchaeota archaeon
GCA_003601835.1	PIYB00000000	SAMN08103058	M8_bin162	Candidatus Bathyarchaeota archaeon
GCA_003601605.1	PIXZ00000000	SAMN08103060	M8_bin1642	Candidatus Bathyarchaeota archaeon
GCA_003601595.1	PIXY00000000	SAMN08103061	M8_bin26	Candidatus Bathyarchaeota archaeon
GCA_003601785.1	PIYA00000000	SAMN08103059	M8_bin163	Candidatus Bathyarchaeota archaeon
GCA_003601775.1	PIYN00000000	SAMN08103046	M10_bin139	Candidatus Bathyarchaeota archaeon
GCA_003601715.1	PIYI00000000	SAMN08103051	M10_bin190	Candidatus Bathyarchaeota archaeon
GCA_003601725.1	PIYJ00000000	SAMN08103050	M10_bin190	Candidatus Bathyarchaeota archaeon
GCA_003601735.1	PIYL00000000	SAMN08103048	M10_bin182	Candidatus Bathyarchaeota archaeon
GCA_003601695.1	PIYH00000000	SAMN08103052	M10_bin190	Candidatus Bathyarchaeota archaeon
GCA_003601665.1	PIYG00000000	SAMN08103053	M10_bin208	Candidatus Bathyarchaeota archaeon
GCA_003601655.1	PIYE00000000	SAMN08103055	M10_bin241	Candidatus Bathyarchaeota archaeon
GCA_003601635.1	PIYD00000000	SAMN08103056	M10_bin242	Candidatus Bathyarchaeota archaeon
GCA_003601545.1	PIXV00000000	SAMN08103064	WYZ-LMO12	Candidatus Methanophagales archaeon
GCA_003601795.1	PIXU00000000	SAMN08103065	WYZ-LMO13	Candidatus Methanophagales archaeon
GCA_003601555.1	PIXX00000000	SAMN08103062	WYZ-LMO15	Candidatus Syntrophoarchaeum sp. WYZ-LMO15

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marine sediment metagenome

Metagenomic sequencing from Guaymas Basin Metagenome

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