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Accession: PRJNA386514 ID: 386514

Single cell sequencing from a hot spring in Yellowstone National Park

This study isolated and sequenced multiple single cells from an acid chloride hot spring in Yellowstone National Park. More...

Accession	PRJNA386514
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Munson-McGee JH et al., "Nanoarchaeota, Their Sulfolobales Host, and Nanoarchaeota Virus Distribution across Yellowstone National Park Hot Springs.", Appl Environ Microbiol, 2015 Nov;81(22):7860-8 Published online: "Nanoarchaeota , Their Sulfolobales Host , and Nanoarchaeota Virus Distribution across Yellowstone National Park Hot Springs", Applied and environmental microbiology, 2015;81(22):7860-7868
Grants	"MO: Diversity and Ecology of Archael Viruses from Yellowstone Thermal Environments" (Grant ID 0802200, National Science Foundation) "Dimensions: Costs and benefits of chronic viral infections in natural ecosystems" (Grant ID DEB-4W4596, National Science Foundation)
Submission	Registration date: 12-May-2017 Montana State University
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	976
WGS master	13
Protein Sequences	10396
Publications
PubMed	1
PMC	1
Other datasets
BioSample	13
Assembly	13

Assembly details:

Assembly level

Number of Assemblies

Contig

13
13

Assembly	Level	WGS	BioSample	Isolate	Taxonomy
GCA_003086435.1		QEFD00000000	SAMN06968115	SCGC AC-742_N10	Acidianus hospitalis
GCA_003086325.1		QEFF00000000	SAMN06968113	SCGC AC-742_E15	Acidilobus sp. SCGC AC-742_E15
GCA_003086315.1		QEFE00000000	SAMN06968114	SCGC AC-742_M05	Acidilobus sp. SCGC AC-742_M05
GCA_003086475.1		QEFH00000000	SAMN06968111	SCGC AB-777_O03	Candidatus Nanobsidianus stetteri
GCA_003086415.2		QEFP00000000	SAMN06968103	SCGC AB-777_F03	Candidatus Nanobsidianus stetteri
GCA_003086535.1		QEFM00000000	SAMN06968106	SCGC AB-777_J03	Sulfolobales archaeon SCGC AB-777_J03
GCA_003086575.1		QEFK00000000	SAMN06968108	SCGC AB-777_K09	Sulfolobales archaeon SCGC AB-777_K09
GCA_003086495.1		QEFJ00000000	SAMN06968109	SCGC AB-777_K20	Sulfolobales archaeon SCGC AB-777_K20
GCA_003086455.1		QEFG00000000	SAMN06968112	SCGC AB-777_J04	Sulfolobus islandicus
GCA_003086385.1		QEFO00000000	SAMN06968104	SCGC AB-777_G05	Sulfolobus sp. SCGC AB-777_G05
GCA_003086555.1		QEFN00000000	SAMN06968105	SCGC AB-777_G06	Sulfolobus sp. SCGC AB-777_G06
GCA_003086375.1		QEFI00000000	SAMN06968110	SCGC AB-777_L09	Sulfolobus sp. SCGC AB-777_L09
GCA_003086515.1		QEFL00000000	SAMN06968107	SCGC AB-777_J10	Vulcanisaeta sp. SCGC AB-777_J10

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