Bacteria (ID 389557) - BioProject

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Accession: PRJNA389557 ID: 389557

Bacteria

GCID Multi-drug resistant Gram-negative clinical isolates from Thailand

This is the umbrella project for a new project to sequence up to 200 Gram-negative MDR clinical isolates from Thailand.

Accession	PRJNA389557
Data Type	Genome sequencing and assembly
Scope	Multispecies
Grants	"The J. Craig Venter Institute Genome Center For Infectious Diseases" (Grant ID U19AI110819, National Institute for Allergy and Infectious Diseases)
Submission	Registration date: 22-Jun-2017 JCVI
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	20210
WGS master	187
Genomic DNA	30
SRA Experiments	191
Protein Sequences	935918
Other datasets
BioSample	191
Assembly	190

Assembly details:

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Assembly level

Number of Assemblies

Complete genome

Contig

Total

3
17
20

Assembly	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_002246595.3		12	SAMN07450616	ECCTRSRTH03	Escherichia coli
GCA_002246485.2	NQAI00000000	1	SAMN07450579	ECCTRPRTH03	Escherichia coli
GCA_002247995.2	NQCR00000000	2	SAMN07450610	ECCTRSRTH09	Escherichia coli
GCA_002251815.2	NQLI00000000	1	SAMN07450611	ECCTRSRTH08	Escherichia coli
GCA_002247905.2	NQCO00000000	1	SAMN07450614	ECCTRSRTH05	Escherichia coli
GCA_002246495.2	NQAH00000000	1	SAMN07450580	ECCTRPRTH02	Escherichia coli
GCA_002246115.2	NPZJ00000000		SAMN07450615	ECCTRSRTH04	Escherichia coli
GCA_002247975.2	NQCQ00000000		SAMN07450612	ECCTRSRTH07	Escherichia coli
GCA_002247965.2	NQCP00000000		SAMN07450613	ECCTRSRTH06	Escherichia coli
GCA_002247765.2	NQBX00000000		SAMN07450631	ECSW+08	Escherichia coli
GCA_002247775.2	NQBW00000000		SAMN07450632	ECSW+07	Escherichia coli
GCA_002248115.3		11	SAMN07450602	KPCTRSRTH07	Klebsiella pneumoniae subsp. pneumoniae
GCA_002251875.3		7	SAMN07450608	KPCTRSRTH01	Klebsiella pneumoniae subsp. pneumoniae
GCA_002248045.2	NQCT00000000		SAMN07450607	KPCTRSRTH02	Klebsiella pneumoniae subsp. pneumoniae
GCA_002248955.2	NQDA00000000	1	SAMN07450600	KPCTRSRTH09	Klebsiella pneumoniae subsp. pneumoniae
GCA_002248105.2	NQCX00000000	2	SAMN07450603	KPCTRSRTH06	Klebsiella pneumoniae subsp. pneumoniae
GCA_002744555.1	NQDG00000000		SAMN07450645	KPLC+02	Klebsiella pneumoniae subsp. pneumoniae
GCA_002248945.2	NQCW00000000	1	SAMN07450604	KPCTRSRTH05	Klebsiella quasipneumoniae subsp. similipneumoniae
GCA_002248085.2	NQCV00000000	1	SAMN07450605	KPCTRSRTH04	Klebsiella quasipneumoniae subsp. similipneumoniae
GCA_002248055.2	NQCU00000000		SAMN07450606	KPCTRSRTH03	Klebsiella quasipneumoniae subsp. similipneumoniae

SRA Data Details

Parameter	Value
Data volume, Gbases	143
Data volume, Mbytes	63939

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Bacteria

GCID Multi-drug resistant Gram-negative clinical isolates from Thailand

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