Bacteria (ID 353361) - BioProject

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Accession: PRJNA353361 ID: 353361

Bacteria

HMH-CDI project for common multidrug-resistant organisms.

Whole genome sequencing of common multidrug-resistant organisms, such as Methicillin-Resistant Staphylococcus aureus (MRSA), Carbapenem-Resistant Enterobacteriaceae (CRE), and Multi-drug-resistant tuberculosis (MDR-TB).

Accession	PRJNA353361
Data Type	Genome sequencing and assembly
Scope	Multispecies
Submission	Registration date: 11-Jan-2017 New Jersey Medical School-Rutgers University
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	1625
WGS master	14
SRA Experiments	64
Protein Sequences	71227
Other datasets
BioSample	78
Assembly	14

Assembly details:

Download

Assembly level

Number of Assemblies

Contig

Total

14
14

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_002120075.1	MSZN00000000	SAMN06200344	GZAF1	Alcaligenes faecalis
GCA_002120045.1	MSZR00000000	SAMN06200348	GZAF5	Alcaligenes faecalis
GCA_002120025.1	MSZQ00000000	SAMN06200347	GZAF4	Alcaligenes faecalis
GCA_002119985.1	MSZO00000000	SAMN06200345	GZAF2	Alcaligenes faecalis
GCA_002119995.1	MSZP00000000	SAMN06200346	GZAF3	Alcaligenes faecalis
GCA_001945455.1	MPJB00000000	SAMN06014568	97_38	Klebsiella michiganensis
GCA_002119895.1	MSZH00000000	SAMN06200338	KL033	Klebsiella pneumoniae
GCA_002119885.1	MSZG00000000	SAMN06200337	KL027	Klebsiella pneumoniae
GCA_002119955.1	MSZJ00000000	SAMN06200340	KP024	Klebsiella pneumoniae
GCA_002120065.1	MSZM00000000	SAMN06200343	KL064	Klebsiella pneumoniae
GCA_002120105.1	MSZL00000000	SAMN06200342	KL015	Klebsiella pneumoniae
GCA_001945475.1	MPJA00000000	SAMN06014567	97_58	Klebsiella pneumoniae
GCA_002119945.1	MSZK00000000	SAMN06200341	KP025	Klebsiella quasipneumoniae
GCA_002119865.1	MSZI00000000	SAMN06200339	KP007	Klebsiella variicola

SRA Data Details

Parameter	Value
Data volume, Gbases	64
Data volume, Mbytes	30050

Supplemental Content

Related information

Assembly
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BioSample
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Genome
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Nucleotide
Related Nucleotide entry
Protein
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Related Genes
Genes related to a genome project
SRA
All related SRA Experiments
Taxonomy
Taxonomy Links
WGS master
Link to WGS master record(s)

LinkOut to external resources

GOLD: 14 Sequencing Projects [Genomes On Line Database]
GOLD: 14 Sequencing Projects
Genomes On Line Database
2837524922: Alcaligenes faecalis GZAF4 [Integrated Microbial Genomes]
2837524922: Alcaligenes faecalis GZAF4
Integrated Microbial Genomes
2840480382: Alcaligenes faecalis GZAF3 [Integrated Microbial Genomes]
2840480382: Alcaligenes faecalis GZAF3
Integrated Microbial Genomes
2843309000: Alcaligenes faecalis GZAF2 [Integrated Microbial Genomes]
2843309000: Alcaligenes faecalis GZAF2
Integrated Microbial Genomes
SILVA LSU Database [SILVA]
SILVA LSU Database
SILVA
SILVA SSU Database [SILVA]
SILVA SSU Database
SILVA

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HMH-CDI project for common multidrug-resistant organisms.

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