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Accession: PRJNA275434 ID: 275434

Drosophila melanogaster (fruit fly)

Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and snf[148] ovary Transcriptomes

See Genome Information for Drosophila melanogaster
Comparison of wild type and tumorous ovaries reveals that tumors inappropriately express a large number of testis genes Overall design: mRNA profiles of ovaries from 0-24 hour virgin wild type (WT) and 3 day old snf[148] females were generated by deep sequencing, in duplicate, using Illumina HiSeq 2500.
AccessionPRJNA275434; GEO: GSE65932
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismDrosophila melanogaster[Taxonomy ID: 7227]
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora; Drosophila melanogaster
PublicationsShapiro-Kulnane L et al., "Maintenance of Drosophila germline stem cell sexual identity in oogenesis and tumorigenesis.", Development, 2015 Mar 15;142(6):1073-82
SubmissionRegistration date: 13-Feb-2015
Genetics and Genome Sciences, Case Western Reserve University School of Medicine
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments4
Publications
PubMed1
PMC1
Other datasets
BioSample4
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1
SRA Data Details
ParameterValue
Data volume, Gbases58
Data volume, Mbytes24120

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