See
Genome Information for Danio rerio
Microarrays containing the Compgen/Sigma-Genosys XEBLIB96 oligo set (which represents about 12,500 unique genes) was used to identify 100 genes up-regulated more than 2-fold by hoxb1b in zebrafish embryos
Overall design: Fertilized zebrafish embryos were injected with hoxb1+meis3 mRNA or meis3 mRNA alone and raised to 14 hpf followed by dissection of the anterior 1/3 of the embryo to identify genes ectopically induced by Hoxb1b.
| Accession | PRJNA144621; GEO: GSE30632 |
| Data Type | Transcriptome or Gene expression |
| Scope | Multiisolate |
| Organism | Danio rerio[Taxonomy ID: 7955] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio; Danio rerio |
| Publications | Choe SK et al., "A screen for hoxb1-regulated genes identifies ppp1r14al as a regulator of the rhombomere 4 Fgf-signaling center.", Dev Biol, 2011 Oct 15;358(2):356-67 |
| Submission | Registration date: 15-Jul-2011
Biochemistry and Mol Pharmacology, University of Massachusetts Medical School |
| Relevance | Model Organism |
Project Data:
| Resource Name | Number
of Links |
|---|
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| GEO DataSets | 1 |
GEO Data Details| Parameter | Value |
|---|
| Data volume, Spots | 97062 |
| Data volume, Processed Mbytes | 2 |
| Data volume, Supplementary Mbytes | 8 |