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Accession: PRJNA1008851 ID: 1008851

Epidemiologic investigation of Salmonella typhimurium

Epidemiologic investigation of Salmonella typhimurium
AccessionPRJNA1008851
Data TypeGenome sequencing
ScopeMultispecies
PublicationsGong B et al., "Epidemiological, Genetic, and Phenotypic Characteristics of Non-Typhoidal Salmonella in Young Children, as Obtained from a Tertiary Hospital in Guangzhou, China.", Microorganisms, 2023 Sep 28;11(10)
SubmissionRegistration date: 23-Aug-2023
Fifth Affiliated Hospital, Southern Medical University
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)154
Publications
PubMed1
PMC1
Other datasets
BioSample164
Assembly154
Assembly details:
Assembly levelNumber of Assemblies
1
153
154
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_042862435.1ContigJAVRNY000000000SAMN37130610
1101-54
GCA_042862265.1ContigJAVMPG000000000SAMN37130710
1103-41
GCA_042862425.1ContigJAVRNZ000000000SAMN37130594
1101-14
GCA_042862355.1ContigJAVRNX000000000SAMN37130651
1102-40
GCA_042862375.1ContigJAVMPK000000000SAMN37130629
1101-91
GCA_042862365.1ContigJAVMPJ000000000SAMN37130693
1103-16
GCA_042862345.1ContigJAVMPI000000000SAMN37130699
1103-24
GCA_042862305.1ContigJAVRNW000000000SAMN37130703
1103-26
GCA_042862315.1ContigJAVMPH000000000SAMN37130700
1103-25
GCA_046445265.1ContigJAVGIX000000000SAMN37130583
816-100
GCA_046445245.1ContigJAVGIW000000000SAMN37130584
816-99
GCA_046445225.1ContigJAVGIU000000000SAMN37130586
1101-7
GCA_046445185.1ContigJAVGIT000000000SAMN37130587
1101-8
GCA_046445195.1ContigJAVGIR000000000SAMN37130589
1101-1
GCA_046445165.1ContigJAVGIS000000000SAMN37130588
1101-9
GCA_046445145.1ContigJAVGIP000000000SAMN37130591
1101-10
GCA_046445125.1ContigJAVGIQ000000000SAMN37130590
1101-6
GCA_046445105.1ContigJAVGIJ000000000SAMN37130598
1101-32
GCA_046445085.1ContigJAVGIO000000000SAMN37130592
1101-11
GCA_046445065.1ContigJAVGIN000000000SAMN37130593
1101-12
GCA_046445045.1ContigJAVGIK000000000SAMN37130597
1101-27
GCA_046445025.1ContigJAVGIL000000000SAMN37130596
1101-19
GCA_046445005.1ContigJAVGII000000000SAMN37130599
1101-33
GCA_046444985.1ContigJAVGIH000000000SAMN37130600
1101-39
GCA_046444965.1ContigJAVGID000000000SAMN37130604
1101-47
GCA_046444945.1ContigJAVGIC000000000SAMN37130605
1101-49
GCA_046444925.1ContigJAVGIG000000000SAMN37130601
1101-36
GCA_046444905.1ContigJAVGIF000000000SAMN37130602
1101-38
GCA_046444885.1ContigJAVGIA000000000SAMN37130607
1101-55
GCA_046444865.1ContigJAVGIB000000000SAMN37130606
1101-45
GCA_046444825.1ContigJAVGHW000000000SAMN37130612
1101-61
GCA_046444835.1ContigJAVGHX000000000SAMN37130611
1101-58
GCA_046444805.1ContigJAVGHY000000000SAMN37130609
1101-51
GCA_046444785.1ContigJAVGHZ000000000SAMN37130608
1101-48
GCA_046444765.1ContigJAVGHU000000000SAMN37130614
1101-60
GCA_046444745.1ContigJAVGHV000000000SAMN37130613
1101-59
GCA_046444725.1ContigJAVGHR000000000SAMN37130617
1101-71
GCA_046444705.1ContigJAVGHS000000000SAMN37130616
1101-68
GCA_046444685.1ContigJAVGHT000000000SAMN37130615
1101-67
GCA_046444665.1ContigJAVGHQ000000000SAMN37130618
1101-74
GCA_046444645.1ContigJAVGHP000000000SAMN37130619
1101-77
GCA_046444625.1ContigJAVGHN000000000SAMN37130621
1101-81
GCA_046444605.1ContigJAVGHM000000000SAMN37130622
1101-82
GCA_046444585.1ContigJAVGHK000000000SAMN37130624
1101-84
GCA_046444565.1ContigJAVGHL000000000SAMN37130623
1101-83
GCA_046444545.1ContigJAVGHJ000000000SAMN37130625
1101-87
GCA_046444525.1ContigJAVGHI000000000SAMN37130626
1101-90
GCA_046444505.1ContigJAVGHG000000000SAMN37130628
1101-89
GCA_046444485.1ContigJAVGHF000000000SAMN37130630
1101-93
GCA_046444465.1ScaffoldJAVGHH000000000SAMN37130627
1101-88
GCA_046444435.1ContigJAVGHE000000000SAMN37130631
1101-97
GCA_046444425.1ContigJAVGHD000000000SAMN37130632
1101-95
GCA_046444405.1ContigJAVGHC000000000SAMN37130633
1101-96
GCA_046444385.1ContigJAVGHB000000000SAMN37130634
1101-100
GCA_046444365.1ContigJAVGHA000000000SAMN37130635
1102-8
GCA_046444345.1ContigJAVGGY000000000SAMN37130637
1102-11
GCA_046444315.1ContigJAVGGX000000000SAMN37130638
1102-12
GCA_046444305.1ContigJAVGGZ000000000SAMN37130636
1102-9
GCA_046444285.1ContigJAVGGV000000000SAMN37130640
1102-16
GCA_046444265.1ContigJAVGGS000000000SAMN37130643
1102-26
GCA_046444245.1ContigJAVGGU000000000SAMN37130641
1102-17
GCA_046444225.1ContigJAVGGT000000000SAMN37130642
1102-18
GCA_046444205.1ContigJAVGGQ000000000SAMN37130645
1102-27
GCA_046444185.1ContigJAVGGR000000000SAMN37130644
1102-22
GCA_046444165.1ContigJAVGGP000000000SAMN37130646
1102-34
GCA_046444145.1ContigJAVGGO000000000SAMN37130647
1102-31
GCA_046444125.1ContigJAVGGM000000000SAMN37130649
1102-38
GCA_046444105.1ContigJAVGGL000000000SAMN37130650
1102-41
GCA_046444085.1ContigJAVGGN000000000SAMN37130648
1102-39
GCA_046444065.1ContigJAVGGI000000000SAMN37130654
1102-46
GCA_046444045.1ContigJAVGGK000000000SAMN37130652
1102-42
GCA_046444025.1ContigJAVGGJ000000000SAMN37130653
1102-43
GCA_046444005.1ContigJAVGGH000000000SAMN37130655
1102-44
GCA_046443985.1ContigJAVGGF000000000SAMN37130657
1102-49
GCA_046443965.1ContigJAVGGG000000000SAMN37130656
1102-48
GCA_046443945.1ContigJAVGGD000000000SAMN37130659
1102-53
GCA_046443905.1ContigJAVGGC000000000SAMN37130660
1102-57
GCA_046443885.1ContigJAVGGE000000000SAMN37130658
1102-50
GCA_046443825.1ContigJAVGGB000000000SAMN37130661
1102-54
GCA_046443805.1ContigJAVGGA000000000SAMN37130662
1102-51
GCA_046443765.1ContigJAVGFZ000000000SAMN37130663
1102-56
GCA_046443745.1ContigJAVGFU000000000SAMN37130668
1102-66
GCA_046443725.1ContigJAVGFY000000000SAMN37130664
1102-59
GCA_046443695.1ContigJAVGFX000000000SAMN37130665
1102-60
GCA_046443685.1ContigJAVGFW000000000SAMN37130666
1102-62
GCA_046443665.1ContigJAVGFV000000000SAMN37130667
1102-61
GCA_046443645.1ContigJAVGFS000000000SAMN37130670
1102-65
GCA_046443625.1ContigJAVGFT000000000SAMN37130669
1102-64
GCA_046443605.1ContigJAVGFQ000000000SAMN37130672
1102-83
GCA_046443585.1ContigJAVGFR000000000SAMN37130671
1102-69
GCA_046443565.1ContigJAVGFO000000000SAMN37130674
1102-84
GCA_046443525.1ContigJAVGFP000000000SAMN37130673
1102-86
GCA_046443545.1ContigJAVGFN000000000SAMN37130675
1102-73
GCA_046443505.1ContigJAVGFM000000000SAMN37130676
1102-76
GCA_046443485.1ContigJAVGFL000000000SAMN37130677
1102-79
GCA_046443465.1ContigJAVGFI000000000SAMN37130680
1102-88
GCA_046443445.1ContigJAVGFJ000000000SAMN37130679
1102-82
GCA_046443425.1ContigJAVGFH000000000SAMN37130681
1102-92
GCA_046443405.1ContigJAVGFG000000000SAMN37130682
1102-90
GCA_046443385.1ContigJAVGFE000000000SAMN37130684
1102-91
GCA_046443365.1ContigJAVGFF000000000SAMN37130683
1102-95
GCA_046443325.1ContigJAVGFC000000000SAMN37130686
1102-97
GCA_046443345.1ContigJAVGFD000000000SAMN37130685
1102-96
GCA_046443305.1ContigJAVGFB000000000SAMN37130687
1103-2
GCA_046443285.1ContigJAVGEZ000000000SAMN37130689
1103-5
GCA_046443265.1ContigJAVGFA000000000SAMN37130688
1103-7
GCA_046443245.1ContigJAVGEX000000000SAMN37130691
1103-8
GCA_046443225.1ContigJAVGET000000000SAMN37130696
1103-19
GCA_046443205.1ContigJAVGEV000000000SAMN37130694
1103-14
GCA_046443185.1ContigJAVGEW000000000SAMN37130692
1103-9
GCA_046443165.1ContigJAVGEU000000000SAMN37130695
1103-13
GCA_046443145.1ContigJAVGES000000000SAMN37130697
1103-17
GCA_046443125.1ContigJAVGEO000000000SAMN37130704
1103-29
GCA_046443105.1ContigJAVGER000000000SAMN37130698
1103-15
GCA_046443065.1ContigJAVGEQ000000000SAMN37130701
1103-22
GCA_046443075.1ContigJAVGEP000000000SAMN37130702
1103-21
GCA_046443045.1ContigJAVGEL000000000SAMN37130707
1103-31
GCA_046443025.1ContigJAVGEM000000000SAMN37130706
1102-70
GCA_046443005.1ContigJAVGEK000000000SAMN37130708
1103-33
GCA_046442985.1ContigJAVGEJ000000000SAMN37130709
1103-40
GCA_046442965.1ContigJAVGEH000000000SAMN37130712
1103-54
GCA_046442945.1ContigJAVGEI000000000SAMN37130711
1103-47
GCA_046442925.1ContigJAVGEG000000000SAMN37130713
1103-52
GCA_046442905.1ContigJAVGEF000000000SAMN37130714
1103-56
GCA_046442885.1ContigJAVGEE000000000SAMN37130715
1103-57
GCA_046442865.1ContigJAVGED000000000SAMN37130716
1103-61
GCA_046442845.1ContigJAVGEC000000000SAMN37130717
1103-66
GCA_046442825.1ContigJAVGEA000000000SAMN37130719
1103-70
GCA_046442805.1ContigJAVGEB000000000SAMN37130718
1103-58
GCA_046442785.1ContigJAVGDZ000000000SAMN37130720
1103-74
GCA_046442765.1ContigJAVGDY000000000SAMN37130721
1103-72
GCA_046442745.1ContigJAVGDX000000000SAMN37130722
1103-77
GCA_046442725.1ContigJAVGDW000000000SAMN37130723
1103-80
GCA_046442665.1ContigJAVGDU000000000SAMN37130725
1103-79
GCA_046442655.1ContigJAVGDV000000000SAMN37130724
1103-81
GCA_046442645.1ContigJAVGDT000000000SAMN37130726
1103-83
GCA_046442635.1ContigJAVGDR000000000SAMN37130728
1103-97
GCA_046442625.1ContigJAVGDS000000000SAMN37130727
1103-95
GCA_046442555.1ContigJAVGDO000000000SAMN37130731
1103-98
GCA_046442545.1ContigJAVGDM000000000SAMN37130733
1104-2
GCA_046442565.1ContigJAVGDQ000000000SAMN37130729
1103-96
GCA_046442525.1ContigJAVGDN000000000SAMN37130732
1104-1
GCA_046442535.1ContigJAVGDP000000000SAMN37130730
1103-99
GCA_046442505.1ContigJAVGDL000000000SAMN37130734
1104-4
GCA_046442455.1ContigJAVGDI000000000SAMN37130737
1104-7
GCA_046442445.1ContigJAVGDF000000000SAMN37130740
1104-16
GCA_046442435.1ContigJAVGDK000000000SAMN37130735
1104-3
GCA_046442425.1ContigJAVGDJ000000000SAMN37130736
1104-6
GCA_046442405.1ContigJAVGDH000000000SAMN37130738
1104-13
GCA_046442345.1ContigJAVGDE000000000SAMN37130741
1104-19
GCA_046442335.1ContigJAVGDA000000000SAMN37130745
1104-31
GCA_046442325.1ContigJAVGDD000000000SAMN37130742
1104-24
GCA_046442315.1ContigJAVGDG000000000SAMN37130739
1104-14
GCA_046442305.1ContigJAVGDB000000000SAMN37130744
817-7

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