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Accession: PRJNA258403 ID: 258403

Cronobacter

Cronobacter GenomeTrakr Project: FDA-CFSAN

Whole genome sequencing of cultured Cronobacter species as part of the FDA's Center for Food Safety and Applied Nutrition (CFSAN) surveillance project for rapid detection of foodborne illness outbreaks.
AccessionPRJNA258403
Data TypeGenome sequencing and assembly
ScopeMultispecies
Publications (total 9)
  • Jang H et al., "Whole-Genome Sequences of Cronobacter sakazakii Isolates Obtained from Foods of Plant Origin and Dried-Food Manufacturing Environments.", Genome Announc, 2018 Apr 12;6(15)
More...
SubmissionRegistration date: 21-Apr-2015
FDA/CFSAN
Related Resources
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)20916
WGS master1714
Genomic DNA158
SRA Experiments1679
Protein Sequences956660
Publications
PubMed9
PMC9
Other datasets
BioSample2026
Assembly1716
Assembly details:
Assembly levelNumber of Assemblies
2
58
1656
1716
AssemblyLevelWGSChrsBioSampleStrainTaxonomy
GCA_016087195.1ContigAAXWFA000000000
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SAMN38369482
CFSAN134917
GCA_033945445.1ContigABPDSW000000000
SAMN38369587
CFSAN135017
GCA_033943985.1ContigABPDPZ000000000
SAMN38370276
CFSAN134898
GCA_033944045.1ContigABPDQE000000000
SAMN38370249
CFSAN134904
GCA_033944585.1ContigABPDRG000000000
SAMN38369899
CFSAN135072
GCA_033944705.1ContigABPDRK000000000
SAMN38369894
CFSAN135014
GCA_007845795.1ContigVOEL00000000
SAMN12391532
MOD1_Md1sN
GCA_030026745.1ScaffoldJASEQZ000000000
SAMN34999857
MOD1-CQ7
GCA_000409325.1ContigAJKW00000000
SAMN02952930
NCTC 9529
GCA_033941205.1ContigABPDKU000000000
SAMN38372184
CFSAN134941
GCA_033940045.1ContigABPDIM000000000
SAMN38372251
CFSAN135011
GCA_033962495.1ContigABPEHT000000000
SAMN38447740
CFSAN134960
GCA_033972325.1ContigABPETP000000000
SAMN38447957
CFSAN135200
GCA_030165245.1ContigJASNFP000000000
SAMN35038508
MOD1-CQ119
GCA_000486025.1ContigAXDM00000000
SAMN02319257
z610
GCA_000485925.1ContigAVPP00000000
SAMN02319256
z508
SRA Data Details
ParameterValue
Data volume, Gbases656
Data volume, Tbytes0.37

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