Lepisosteus oculatus isolate:fLepOcu1 (ID 1158843) - BioProject

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Accession: PRJNA1158843 ID: 1158843

Lepisosteus oculatus isolate:fLepOcu1 (spotted gar)

Lepisosteus oculatus isolate:fLepOcu1 RefSeq Genome sequencing and assembly

See Genome Information for Lepisosteus oculatus

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This project is a component of the Lepisosteus oculatus (spotted gar) genome, fLepOcu1

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8 additional projects are related by organism.

4 additional projects are components of the Lepisosteus oculatus (spotted gar) genome, fLepOcu1.

The reference sequence (RefSeq) genome assembly is derived from the submitted GenBank assembly (see linked project PRJNA1106999). Annotation provided on the RefSeq genomic records is based on NCBI annotation pipeline.

Accession	PRJNA1158843
Data Type	RefSeq Genome sequencing and assembly
Scope	Monoisolate
Organism	Lepisosteus oculatus[Taxonomy ID: 7918] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus; Lepisosteus oculatus
Publications	Rhie A et al., "Towards complete and error-free genome assemblies of all vertebrate species.", Nature, 2021 Apr;592(7856):737-746 Pasquier J et al., "Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.", BMC Genomics, 2016 May 18;17:368
Submission	Registration date: 1-May-2024 Vertebrate Genomes Project - None - Rockefeller Vertebrate Genome Lab
Related Resources	Braasch Lab
Relevance	Reference Genome
Locus Tag Prefix	ACEZHI

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	65475
Transcript	64630
Protein Sequences	48387
Publications
PubMed	2
PMC	2
Other datasets
BioSample	1
Assembly	1

Assembly details:

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Assembly	Level	WGS	Chrs	BioSample	Taxonomy
GCF_040954835.1	Chromosome	JBDILY000000000	29	SAMN41155427	Lepisosteus oculatus

Related GenBank Project

PRJNA1106999 : Lepisosteus oculatus (spotted gar) genome, fLepOcu1, haplotype 2

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Lepisosteus oculatus isolate:fLepOcu1 (spotted gar)

Lepisosteus oculatus isolate:fLepOcu1 RefSeq Genome sequencing and assembly

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