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Accession: PRJEB79030 ID: 1167117

Erythromycin resistant Campylobacter jejuni and Campylobacter coli in France between 2018 and 2023

Genomes of French erythromycin resistant Campylobacter

Between 2018 and 2023, 280 isolates of either Campylobacter jejuni or Campylobacter coli have been identified as resistant to erythromycin. More...
AccessionPRJEB79030
Data TypeGenome sequencing
ScopeMonoisolate
SubmissionRegistration date: 30-Sep-2024
chu de bordeaux
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)11477
WGS master280
Other datasets
BioSample280
Assembly280
Assembly details:
Assembly levelNumber of Assemblies
280
280
AssemblyLevelWGSBioSampleIsolateTaxonomy
GCA_964232245.1ContigCAXROK000000000SAMEA115928720
CNRERY-02124
GCA_964233455.1ContigCAXRTB000000000SAMEA115928734
CNRERY-01157
GCA_964232365.1ContigCAXRON000000000SAMEA115928794
CNRERY-01385
GCA_964233575.1ContigCAXRTC000000000SAMEA115928694
CNRERY-02317
GCA_964232485.1ContigCAXROZ000000000SAMEA115928733
CNRERY-02237
GCA_964233695.1ContigCAXRTQ000000000SAMEA115928810
CNRERY-01403
GCA_964231955.1ContigCAXRNI000000000SAMEA115928676
CNRERY-00920
GCA_964231835.1ContigCAXRMU000000000SAMEA115928803
CNRERY-01394
GCA_964231715.1ContigCAXRMO000000000SAMEA115928768
CNRERY-02685
GCA_964232915.1ContigCAXRRI000000000SAMEA115928690
CNRERY-02301
GCA_964233205.1ContigCAXRSI000000000SAMEA115928700
CNRERY-02671
GCA_964232115.1ContigCAXROT000000000SAMEA115928816
CNRERY-01422
GCA_964233325.1ContigCAXRSG000000000SAMEA115928827
CNRERY-01436
GCA_964232235.1ContigCAXROC000000000SAMEA115928628
CNRERY-00708
GCA_964233345.1ContigCAXRUF000000000SAMEA115928665
CNRERY-02759
GCA_964233445.1ContigCAXRST000000000SAMEA115928698
CNRERY-02318
GCA_964232495.1ContigCAXROY000000000SAMEA115928856
CNRERY-01631
GCA_964233585.1ContigCAXRSZ000000000SAMEA115928826
CNRERY-01501
GCA_964232135.1ContigCAXRPS000000000SAMEA115928861
CNRERY-01561
GCA_964231945.1ContigCAXRNE000000000SAMEA115928710
CNRERY-02119
GCA_964231825.1ContigCAXRMX000000000SAMEA115928805
CNRERY-01400
GCA_964231705.1ContigCAXRMI000000000SAMEA115928842
CNRERY-01531
GCA_964232805.1ContigCAXRQP000000000SAMEA115928613
CNRERY-02684
GCA_964232925.1ContigCAXRRK000000000SAMEA115928647
CNRERY-02735
GCA_964232005.1ContigCAXRNF000000000SAMEA115928731
CNRERY-02129
GCA_964233215.1ContigCAXRSK000000000SAMEA115928705
CNRERY-02179
GCA_964232025.1ContigCAXROA000000000SAMEA115928662
CNRERY-02719
GCA_964233235.1ContigCAXRSO000000000SAMEA115928738
CNRERY-02189
GCA_964233355.1ContigCAXRSJ000000000SAMEA115928822
CNRERY-01432
GCA_964232265.1ContigCAXROL000000000SAMEA115928839
CNRERY-01558
GCA_964233475.1ContigCAXRTJ000000000SAMEA115928626
CNRERY-02785
GCA_964232385.1ContigCAXRPA000000000SAMEA115928742
CNRERY-02239
GCA_964233595.1ContigCAXRTN000000000SAMEA115928627
CNRERY-00677
GCA_964231975.1ContigCAXRNN000000000SAMEA115928723
CNRERY-02127
GCA_964232145.1ContigCAXROF000000000SAMEA115928616
CNRERY-02802
GCA_964231855.1ContigCAXRNU000000000SAMEA115928846
CNRERY-01526
GCA_964231615.1ContigCAXRLZ000000000SAMEA115928748
CNRERY-02178
GCA_964233905.1ContigCAXRUN000000000SAMEA115928761
CNRERY-02673
GCA_964233245.1ContigCAXRSH000000000SAMEA115928663
CNRERY-02766
GCA_964232155.1ContigCAXRNP000000000SAMEA115928639
CNRERY-02699
GCA_964233365.1ContigCAXRTA000000000SAMEA115928855
CNRERY-01554
GCA_964232275.1ContigCAXROR000000000SAMEA115928857
CNRERY-01560
GCA_964233485.1ContigCAXRTD000000000SAMEA115928666
CNRERY-02753
GCA_964232395.1ContigCAXRNS000000000SAMEA115928782
CNRERY-01355
GCA_964231965.1ContigCAXROG000000000SAMEA115928834
CNRERY-01509
GCA_964231845.1ContigCAXRMY000000000SAMEA115928795
CNRERY-01383
GCA_964231725.1ContigCAXRMC000000000SAMEA115928793
CNRERY-02687
GCA_964231605.1ContigCAXRLY000000000SAMEA115928708
CNRERY-02180
GCA_964232705.1ContigCAXRQF000000000SAMEA115928670
CNRERY-02249
GCA_964233915.1ContigCAXRUY000000000SAMEA115928624
CNRERY-00676
GCA_964232825.1ContigCAXRRN000000000SAMEA115928660
CNRERY-02723
GCA_964232945.1ContigCAXRRE000000000SAMEA115928682
CNRERY-02307
GCA_964233115.1ContigCAXRRJ000000000SAMEA115928864
CNRERY-01633
GCA_964233105.1ContigCAXRRZ000000000SAMEA115928619
CNRERY-02745
GCA_964232935.1ContigCAXRRC000000000SAMEA115928828
CNRERY-01438
GCA_964233125.1ContigCAXRRP000000000SAMEA115928679
CNRERY-02302
GCA_964232035.1ContigCAXROM000000000SAMEA115928654
CNRERY-02725
GCA_964233135.1ContigCAXRSA000000000SAMEA115928651
CNRERY-02707
GCA_964234225.1ContigCAXRVS000000000SAMEA115928649
CNRERY-00712
GCA_964231995.1ContigCAXRNK000000000SAMEA115928709
CNRERY-02118
GCA_964232045.1ContigCAXRNL000000000SAMEA115928832
CNRERY-01505
GCA_964233255.1ContigCAXRSQ000000000SAMEA115928646
CNRERY-00836
GCA_964231875.1ContigCAXRNB000000000SAMEA115928758
CNRERY-01165
GCA_964232165.1ContigCAXRNT000000000SAMEA115928661
CNRERY-02806
GCA_964233375.1ContigCAXRTS000000000SAMEA115928596
CNRERY-02676
GCA_964232285.1ContigCAXRPR000000000SAMEA115928852
CNRERY-01572
GCA_964233495.1ContigCAXRTL000000000SAMEA115928604
CNRERY-02664
GCA_964233805.1ContigCAXRTR000000000SAMEA115928872
CNRERY-01781
GCA_964233925.1ContigCAXRUZ000000000SAMEA115928707
CNRERY-01309
GCA_964232835.1ContigCAXRQS000000000SAMEA115928648
CNRERY-02747
GCA_964232955.1ContigCAXRQY000000000SAMEA115928862
CNRERY-01562
GCA_964234215.1ContigCAXRVR000000000SAMEA115928704
CNRERY-02666
GCA_964233005.1ContigCAXRRQ000000000SAMEA115928830
CNRERY-01504
GCA_964234235.1ContigCAXRWC000000000SAMEA115928674
CNRERY-02242
GCA_964233025.1ContigCAXRRW000000000SAMEA115928689
CNRERY-02303
GCA_964234115.1ContigCAXRVL000000000SAMEA115928617
CNRERY-02683
GCA_964231985.1ContigCAXRNO000000000SAMEA115928840
CNRERY-01515
GCA_964232055.1ContigCAXRPB000000000SAMEA115928867
CNRERY-01648
GCA_964233265.1ContigCAXRSF000000000SAMEA115928858
CNRERY-01574
GCA_964231865.1ContigCAXRNJ000000000SAMEA115928634
CNRERY-02799
GCA_964232175.1ContigCAXRPH000000000SAMEA115928656
CNRERY-02743
GCA_964233385.1ContigCAXRTK000000000SAMEA115928681
CNRERY-00918
GCA_964231745.1ContigCAXRMH000000000SAMEA115928780
CNRERY-01342
GCA_964231515.1ContigCAXRLN000000000SAMEA115928775
CNRERY-01334
GCA_964232295.1ContigCAXRNZ000000000SAMEA115928765
CNRERY-02677
GCA_964231625.1ContigCAXRLV000000000SAMEA115928760
CNRERY-01349
GCA_964233815.1ContigCAXRUG000000000SAMEA115928809
CNRERY-02551
GCA_964232725.1ContigCAXRQE000000000SAMEA115928618
CNRERY-00706
GCA_964231505.1ContigCAXRLP000000000SAMEA115928786
CNRERY-01344
GCA_964233935.1ContigCAXRVK000000000SAMEA115928796
CNRERY-01386
GCA_964232965.1ContigCAXRQV000000000SAMEA115928691
CNRERY-02314
GCA_964232605.1ContigCAXRPT000000000SAMEA115928771
CNRERY-01338
GCA_964232845.1ContigCAXRQZ000000000SAMEA115928838
CNRERY-01508
GCA_964234105.1ContigCAXRVY000000000SAMEA115928835
CNRERY-01530
GCA_964234125.1ContigCAXRWD000000000SAMEA115928837
CNRERY-01513
GCA_964234005.1ContigCAXRVO000000000SAMEA115928849
CNRERY-01527
GCA_964231895.1ContigCAXRND000000000SAMEA115928640
CNRERY-02765
GCA_964231775.1ContigCAXRMQ000000000SAMEA115928688
CNRERY-02313
GCA_964233035.1ContigCAXRRM000000000SAMEA115928751
CNRERY-01667
GCA_964231655.1ContigCAXRMF000000000SAMEA115928767
CNRERY-01330
GCA_964233155.1ContigCAXRRX000000000SAMEA115928684
CNRERY-02309
GCA_964231535.1ContigCAXRLX000000000SAMEA115928728
CNRERY-02183
GCA_964232065.1ContigCAXRNM000000000SAMEA115928716
CNRERY-02122
GCA_964233275.1ContigCAXRSD000000000SAMEA115928806
CNRERY-01401
GCA_964232185.1ContigCAXROD000000000SAMEA115928606
CNRERY-02710
GCA_964233705.1ContigCAXRTX000000000SAMEA115928597
CNRERY-00703
GCA_964232615.1ContigCAXRQJ000000000SAMEA115928833
CNRERY-01507
GCA_964233825.1ContigCAXRUI000000000SAMEA115928755
CNRERY-02667
GCA_964232735.1ContigCAXRQA000000000SAMEA115928785
CNRERY-01346
GCA_964233945.1ContigCAXRVA000000000SAMEA115928614
CNRERY-00707
GCA_964232855.1ContigCAXRQR000000000SAMEA115928791
CNRERY-01367
GCA_964232975.1ContigCAXRRB000000000SAMEA115928678
CNRERY-02305
GCA_964231885.1ContigCAXRMZ000000000SAMEA115928801
CNRERY-01391
GCA_964234255.1ContigCAXRVW000000000SAMEA115928843
CNRERY-01519
GCA_964231765.1ContigCAXRMP000000000SAMEA115928744
CNRERY-02133
GCA_964233045.1ContigCAXRRV000000000SAMEA115928831
CNRERY-01506
GCA_964234135.1ContigCAXRVX000000000SAMEA115928757
CNRERY-02682
GCA_964231645.1ContigCAXRMR000000000SAMEA115928683
CNRERY-02308
GCA_964231525.1ContigCAXRLQ000000000SAMEA115928732
CNRERY-02185
GCA_964232075.1ContigCAXROO000000000SAMEA115928756
CNRERY-02691
GCA_964233285.1ContigCAXRSP000000000SAMEA115928653
CNRERY-00695
GCA_964232195.1ContigCAXRNR000000000SAMEA115928811
CNRERY-01405
GCA_964232505.1ContigCAXRPN000000000SAMEA115928797
CNRERY-01384
GCA_964233715.1ContigCAXRTP000000000SAMEA115928814
CNRERY-01424
GCA_964232625.1ContigCAXRPV000000000SAMEA115928726
CNRERY-01895
GCA_964233835.1ContigCAXRUO000000000SAMEA115928706
CNRERY-02117
GCA_964232745.1ContigCAXRQG000000000SAMEA115928633
CNRERY-02706
GCA_964233955.1ContigCAXRVB000000000SAMEA115928753
CNRERY-01176
GCA_964232865.1ContigCAXRQW000000000SAMEA115928717
CNRERY-02173
GCA_964234245.1ContigCAXRVQ000000000SAMEA115928820
CNRERY-01430
GCA_964232985.1ContigCAXRQX000000000SAMEA115928594
CNRERY-00748
GCA_964231795.1ContigCAXRMT000000000SAMEA115928754
CNRERY-02689
GCA_964231555.1ContigCAXRLW000000000SAMEA115928740
CNRERY-02131
GCA_964234145.1ContigCAXRVP000000000SAMEA115928625
CNRERY-00675
GCA_964234025.1ContigCAXRWB000000000SAMEA115928715
CNRERY-02121
GCA_964233055.1ContigCAXRRF000000000SAMEA115928772
CNRERY-01354
GCA_964233175.1ContigCAXRRR000000000SAMEA115928644
CNRERY-02739
GCA_964232085.1ContigCAXROW000000000SAMEA115928812
CNRERY-01420
GCA_964233295.1ContigCAXRSR000000000SAMEA115928739
CNRERY-02130
GCA_964233605.1ContigCAXRUJ000000000SAMEA115928658
CNRERY-02769
GCA_964232515.1ContigCAXRPE000000000SAMEA115928798
CNRERY-01387
GCA_964233725.1ContigCAXRTM000000000SAMEA115928642
CNRERY-00710
GCA_964232635.1ContigCAXRPY000000000SAMEA115928652
CNRERY-02698
GCA_964233845.1ContigCAXRUU000000000SAMEA115928641
CNRERY-02755
GCA_964233965.1ContigCAXRUX000000000SAMEA115928719
CNRERY-02123
GCA_964232995.1ContigCAXRRH000000000SAMEA115928865
CNRERY-01638
GCA_964231785.1ContigCAXRMV000000000SAMEA115928721
CNRERY-02182
GCA_964231665.1ContigCAXRMJ000000000SAMEA115928747
CNRERY-02176
GCA_964234035.1ContigCAXRVG000000000SAMEA115928854
CNRERY-01534
GCA_964231545.1ContigCAXRLR000000000SAMEA115928788
CNRERY-01347
GCA_964233185.1ContigCAXRSE000000000SAMEA115928612
CNRERY-02801
GCA_964233065.1ContigCAXRRY000000000SAMEA115928763
CNRERY-01375
GCA_964234155.1ContigCAXRVJ000000000SAMEA115928807
CNRERY-01425
GCA_964232405.1ContigCAXROH000000000SAMEA115928784
CNRERY-01389
GCA_964233735.1ContigCAXRUL000000000SAMEA115928824
CNRERY-01417
GCA_964232525.1ContigCAXRPL000000000SAMEA115928841
CNRERY-01517
GCA_964233855.1ContigCAXRUT000000000SAMEA115928851
CNRERY-01559
GCA_964232765.1ContigCAXRQH000000000SAMEA115928718
CNRERY-01112
GCA_964232095.1ContigCAXRNQ000000000SAMEA115928671
CNRERY-00906
GCA_964233975.1ContigCAXRVF000000000SAMEA115928789
CNRERY-02670
GCA_964231575.1ContigCAXRLT000000000SAMEA115928741
CNRERY-02132
GCA_964234165.1ContigCAXRVN000000000SAMEA115928702
CNRERY-02668
GCA_964234045.1ContigCAXRVV000000000SAMEA115928605
CNRERY-02679
GCA_964233075.1ContigCAXRRT000000000SAMEA115928680
CNRERY-02306
GCA_964233625.1ContigCAXRSX000000000SAMEA115928766
CNRERY-01680
GCA_964233505.1ContigCAXRSW000000000SAMEA115928870
CNRERY-01776
GCA_964232415.1ContigCAXRPD000000000SAMEA115928598
CNRERY-02674
GCA_964232535.1ContigCAXRPK000000000SAMEA115928714
CNRERY-02125
GCA_964233745.1ContigCAXRUC000000000SAMEA115928746
CNRERY-02177
GCA_964232655.1ContigCAXRPW000000000SAMEA115928600
CNRERY-00739
GCA_964233865.1ContigCAXRUS000000000SAMEA115928630
CNRERY-00679
GCA_964232775.1ContigCAXRQQ000000000SAMEA115928781
CNRERY-01343
GCA_964232895.1ContigCAXRQT000000000SAMEA115928863
CNRERY-01584
GCA_964231685.1ContigCAXRMK000000000SAMEA115928737
CNRERY-02188
GCA_964232795.1ContigCAXRQK000000000SAMEA115928687
CNRERY-02300
GCA_964231565.1ContigCAXRMG000000000SAMEA115928693
CNRERY-02315
GCA_964234055.1ContigCAXRVH000000000SAMEA115928645
CNRERY-00711
GCA_964232305.1ContigCAXRNX000000000SAMEA115928620
CNRERY-02697
GCA_964233515.1ContigCAXRSY000000000SAMEA115928829
CNRERY-01533
GCA_964233635.1ContigCAXRTY000000000SAMEA115928615
CNRERY-00883
GCA_964232545.1ContigCAXRPJ000000000SAMEA115928850
CNRERY-01528
GCA_964233755.1ContigCAXRUH000000000SAMEA115928611
CNRERY-00705
GCA_964233875.1ContigCAXRUM000000000SAMEA115928701
CNRERY-02681
GCA_964231695.1ContigCAXRML000000000SAMEA115928595
CNRERY-02686
GCA_964232785.1ContigCAXRQL000000000SAMEA115928776
CNRERY-01336
GCA_964233995.1ContigCAXRUW000000000SAMEA115928792
CNRERY-01388
GCA_964232685.1ContigCAXRPZ000000000SAMEA115928779
CNRERY-01340
GCA_964233895.1ContigCAXRUQ000000000SAMEA115928655
CNRERY-02767
GCA_964234185.1ContigCAXRWE000000000SAMEA115928669
CNRERY-02240
GCA_964234065.1ContigCAXRVE000000000SAMEA115928770
CNRERY-01333
GCA_964231915.1ContigCAXRNG000000000SAMEA115928799
CNRERY-01390
GCA_964233405.1ContigCAXRSS000000000SAMEA115928623
CNRERY-02752
GCA_964232315.1ContigCAXROB000000000SAMEA115928722
CNRERY-02126
GCA_964233525.1ContigCAXRSU000000000SAMEA115928813
CNRERY-01899
GCA_964232435.1ContigCAXRPG000000000SAMEA115928668
CNRERY-02241
GCA_964233645.1ContigCAXRTO000000000SAMEA115928603
CNRERY-00704
GCA_964231485.1ContigCAXRMB000000000SAMEA115928773
CNRERY-01353
GCA_964232555.1ContigCAXRPP000000000SAMEA115928713
CNRERY-02120
GCA_964233765.1ContigCAXRUB000000000SAMEA115928804
CNRERY-01399
GCA_964233885.1ContigCAXRUP000000000SAMEA115928608
CNRERY-02776
GCA_964231465.1ContigCAXRLM000000000SAMEA115928602
CNRERY-00673
GCA_964234175.1ContigCAXRVM000000000SAMEA115928638
CNRERY-00683
GCA_964232575.1ContigCAXRPX000000000SAMEA115928695
CNRERY-00941
GCA_964232695.1ContigCAXRQC000000000SAMEA115928610
CNRERY-00674
GCA_964234075.1ContigCAXRVC000000000SAMEA115928736
CNRERY-01138
GCA_964233785.1ContigCAXRUE000000000SAMEA115928749
CNRERY-02244
GCA_964234195.1ContigCAXRVT000000000SAMEA115928769
CNRERY-01332
GCA_964231905.1ContigCAXRNH000000000SAMEA115928622
CNRERY-00678
GCA_964232205.1ContigCAXRPC000000000SAMEA115928730
CNRERY-02128
GCA_964233415.1ContigCAXRTF000000000SAMEA115928607
CNRERY-02772
GCA_964233535.1ContigCAXRTH000000000SAMEA115928790
CNRERY-02678
GCA_964231595.1ContigCAXRMA000000000SAMEA115928686
CNRERY-02312
GCA_964232445.1ContigCAXROX000000000SAMEA115928609
CNRERY-02672
GCA_964233655.1ContigCAXRUA000000000SAMEA115928745
CNRERY-02175
GCA_964231475.1ContigCAXRLO000000000SAMEA115928778
CNRERY-01339
GCA_964232565.1ContigCAXRPO000000000SAMEA115928774
CNRERY-01328
GCA_964232465.1ContigCAXRPF000000000SAMEA115928659
CNRERY-00714
GCA_964233555.1ContigCAXRTV000000000SAMEA115928635
CNRERY-00680
GCA_964233675.1ContigCAXRTU000000000SAMEA115928818
CNRERY-01428
GCA_964232585.1ContigCAXRPU000000000SAMEA115928787
CNRERY-01345
GCA_964233795.1ContigCAXRUR000000000SAMEA115928817
CNRERY-01423
GCA_964231935.1ContigCAXRNA000000000SAMEA115928657
CNRERY-02777
GCA_964231815.1ContigCAXRMS000000000SAMEA115928800
CNRERY-01392
GCA_964233425.1ContigCAXRUD000000000SAMEA115928675
CNRERY-02669
GCA_964232335.1ContigCAXROI000000000SAMEA115928725
CNRERY-02247
GCA_964233545.1ContigCAXRTG000000000SAMEA115928636
CNRERY-00681
GCA_964232455.1ContigCAXROE000000000SAMEA115928783
CNRERY-01368
GCA_964233665.1ContigCAXRTW000000000SAMEA115928699
CNRERY-02320
GCA_964232355.1ContigCAXRPM000000000SAMEA115928844
CNRERY-01521
GCA_964233565.1ContigCAXRTI000000000SAMEA115928762
CNRERY-02662
GCA_964232475.1ContigCAXRPI000000000SAMEA115928667
CNRERY-02238
GCA_964233305.1ContigCAXRSN000000000SAMEA115928815
CNRERY-01421
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