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Accession: PRJNA591480 ID: 591480

KLEB-GAP: Marine Klebsiella

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This project is a component of the KLEB-GAP umbrella project
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8 additional projects are components of the KLEB-GAP umbrella project.
Whole genome sequencing of K. pneumoniae isolated from the marine environment
AccessionPRJNA591480
Data TypeGenome sequencing and assembly
ScopeMultispecies
Publications
  • Håkonsholm F et al., "Antibiotic Sensitivity Screening of Klebsiella spp. and Raoultella spp. Isolated from Marine Bivalve Molluscs Reveal Presence of CTX-M-Producing K. pneumoniae.", Microorganisms, 2020 Nov 30;8(12)
  • Published online: Håkonsholm F et al., "Insights into the genetic diversity, antibiotic resistance and pathogenic potential of Klebsiella pneumoniae from the Norwegian marine environment using whole-genome analysis", International Journal of Hygiene and Environmental Health, 2022;242
SubmissionRegistration date: 25-Nov-2019
IMR
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)180
WGS master82
Genomic DNA98
SRA Experiments120
Protein Sequences93916
Publications
PubMed1
PMC1
Other datasets
BioSample99
Assembly99
Assembly details:
Assembly levelNumber of Assemblies
Complete genome Complete genome
Contig Contig
Total
18
81
99
AssemblyLevelWGSChrsBioSampleStrainTaxonomy
GCA_022788805.1ContigWPAP00000000
SAMN13382593
2016-1332
Klebsiella pneumoniae
GCA_022788815.1ContigWPAO00000000
SAMN13382594
2016-1394
Klebsiella pneumoniae
GCA_022790525.1ContigWPBW00000000
SAMN13382560
2016-201
Klebsiella pneumoniae
GCA_022790505.1ContigWPBV00000000
SAMN13382561
2016-264
Klebsiella pneumoniae
GCA_022790485.1ContigWPBT00000000
SAMN13382563
2016-498
Klebsiella pneumoniae
GCA_022790465.1ContigWPBU00000000
SAMN13382562
2016-319
Klebsiella pneumoniae
GCA_022790415.1ContigWPBP00000000
SAMN13382567
2016-567
Klebsiella pneumoniae
GCA_022790405.1ContigWPBQ00000000
SAMN13382566
2016-566
Klebsiella pneumoniae
GCA_022790385.1ContigWPBR00000000
SAMN13382565
2016-564
Klebsiella pneumoniae
GCA_022790365.1ContigWPBO00000000
SAMN13382568
2016-637
Klebsiella pneumoniae
GCA_022790345.1ContigWPBN00000000
SAMN13382569
2016-681
Klebsiella pneumoniae
GCA_022790325.1ContigWPBL00000000
SAMN13382571
2016-729
Klebsiella pneumoniae
GCA_022790285.1ContigWPBM00000000
SAMN13382570
2016-727
Klebsiella pneumoniae
GCA_022790265.1ContigWPBJ00000000
SAMN13382573
2016-734
Klebsiella pneumoniae
GCA_022790245.1ContigWPBI00000000
SAMN13382574
2016-735
Klebsiella pneumoniae
GCA_022790215.1ContigWPBH00000000
SAMN13382575
2016-833
Klebsiella pneumoniae
GCA_022790185.1ContigWPBC00000000
SAMN13382580
2016-1145
Klebsiella pneumoniae
GCA_022790145.1ContigWPAZ00000000
SAMN13382583
2016-1200
Klebsiella pneumoniae
GCA_022790115.1ContigWPAV00000000
SAMN13382587
2016-1245
Klebsiella pneumoniae
GCA_022790105.1ContigWPAT00000000
SAMN13382589
2016-1248
Klebsiella pneumoniae
GCA_022790085.1ContigWPAU00000000
SAMN13382588
2016-1246
Klebsiella pneumoniae
GCA_022790065.1ContigWPAY00000000
SAMN13382584
2016-1201
Klebsiella pneumoniae
GCA_022790045.1ContigWPAS00000000
SAMN13382590
2016-1249
Klebsiella pneumoniae
GCA_022789995.1ContigWPAQ00000000
SAMN13382592
2016-1331
Klebsiella pneumoniae
GCA_022789965.1ContigWPAK00000000
SAMN13382598
2016-1398
Klebsiella pneumoniae
GCA_022789945.1ContigWPAJ00000000
SAMN13382599
2016-1399
Klebsiella pneumoniae
GCA_022789925.1ContigJAFCQE000000000
SAMN17766462
2019-400-1
Klebsiella pneumoniae
GCA_022789865.1ContigJAFCQA000000000
SAMN17766466
2019-1394
Klebsiella pneumoniae
GCA_022789845.1ContigJAFCPZ000000000
SAMN17766467
2019-1396
Klebsiella pneumoniae
GCA_022789825.1ContigJAFCQB000000000
SAMN17766465
2019-1349
Klebsiella pneumoniae
GCA_022789785.1ContigJAFCPW000000000
SAMN17766470
2019-1435-2
Klebsiella pneumoniae
GCA_022789765.1ContigJAFCPV000000000
SAMN17766471
2019-1444
Klebsiella pneumoniae
GCA_022789735.1ContigJAFCPT000000000
SAMN17766473
2019-1493-2
Klebsiella pneumoniae
GCA_022789705.1ContigJAFCPQ000000000
SAMN17766476
2019-1499
Klebsiella pneumoniae
GCA_022789665.1ContigJAFCPP000000000
SAMN17766477
2019-1718
Klebsiella pneumoniae
GCA_022789645.1ContigJAFCPO000000000
SAMN17766478
2019-1764
Klebsiella pneumoniae
GCA_022789625.1ContigJAFCPN000000000
SAMN17766479
2019-1765
Klebsiella pneumoniae
GCA_022789595.1ContigJAFCPL000000000
SAMN17766481
2019-1791
Klebsiella pneumoniae
GCA_022789565.1ContigJAFCPJ000000000
SAMN17766483
2019-1814
Klebsiella pneumoniae
GCA_022789545.1ContigJAFCPH000000000
SAMN17766485
2019-1897
Klebsiella pneumoniae
GCA_022789525.1ContigJAFCPK000000000
SAMN17766482
2019-1792
Klebsiella pneumoniae
GCA_022789505.1ContigJAFCPG000000000
SAMN17766486
2019-1898
Klebsiella pneumoniae
GCA_022789485.1ContigJAFCPF000000000
SAMN17766487
2019-1903
Klebsiella pneumoniae
GCA_022789465.1ContigJAFCPE000000000
SAMN17766488
2019-2010
Klebsiella pneumoniae
GCA_022789445.1ContigJAFCPB000000000
SAMN17766491
2019-2060
Klebsiella pneumoniae
GCA_022789425.1ContigJAFCPD000000000
SAMN17766489
2019-2011
Klebsiella pneumoniae
GCA_022789405.1ContigJAFCPC000000000
SAMN17766490
2019-2017-2
Klebsiella pneumoniae
GCA_022789385.1ContigJAFCPA000000000
SAMN17766492
2019-2063-2
Klebsiella pneumoniae
GCA_022789365.1ContigJAFCOZ000000000
SAMN17766493
2019-2120
Klebsiella pneumoniae
GCA_022789315.1ContigJAFCOW000000000
SAMN17766496
2019-2198
Klebsiella pneumoniae
GCA_022789305.1ContigJAFCOV000000000
SAMN17766497
2019-2231
Klebsiella pneumoniae
GCA_022789285.1ContigJAFCOS000000000
SAMN17766500
2020-114
Klebsiella pneumoniae
GCA_022789265.1ContigJAFCOO000000000
SAMN17766504
2020-332
Klebsiella pneumoniae
GCA_022789245.1ContigJAFCOP000000000
SAMN17766503
2020-331
Klebsiella pneumoniae
GCA_022789215.1ContigJAFCON000000000
SAMN17766505
2020-375
Klebsiella pneumoniae
GCA_022789145.1ContigJAFCOI000000000
SAMN17766510
2020-586
Klebsiella pneumoniae
GCA_022789135.1ContigJAFCOH000000000
SAMN17766511
2020-603
Klebsiella pneumoniae
GCA_022789125.1ContigJAFCOJ000000000
SAMN17766509
2020-584-2
Klebsiella pneumoniae
GCA_022789085.1ContigJAFCOG000000000
SAMN17766512
2020-634-2
Klebsiella pneumoniae
GCA_022789065.1ContigJAFCOD000000000
SAMN17766515
2020-680-2
Klebsiella pneumoniae
GCA_022789015.1ContigJAFCOA000000000
SAMN17766518
2020-749
Klebsiella pneumoniae
GCA_022789045.1ContigJAFCOF000000000
SAMN17766513
2020-635
Klebsiella pneumoniae
GCA_022789005.1ContigJAFCOE000000000
SAMN17766514
2020-636-1
Klebsiella pneumoniae
GCA_022788985.1ContigJAFCOC000000000
SAMN17766516
2020-717
Klebsiella pneumoniae
GCA_022788955.1ContigWPBE00000000
SAMN13382578
2016-1072
Klebsiella pneumoniae
GCA_022788935.1ContigWPBF00000000
SAMN13382577
2016-921
Klebsiella pneumoniae
GCA_022788925.1ContigWPBA00000000
SAMN13382582
2016-1198
Klebsiella pneumoniae
GCA_022788905.1ContigWPAW00000000
SAMN13382586
2016-1241
Klebsiella pneumoniae
GCA_022788865.1ContigWPAR00000000
SAMN13382591
2016-1292
Klebsiella pneumoniae
GCA_022788855.1ContigWPAN00000000
SAMN13382595
2016-1395
Klebsiella pneumoniae
GCA_015024285.2Complete genome
2
SAMN13382600
2016-1400
Klebsiella pneumoniae
GCA_022789205.2Complete genome
10
SAMN17766502
2020-314
Klebsiella pneumoniae
GCA_022790205.2Complete genome
8
SAMN13382579
2016-1076
Klebsiella pneumoniae
GCA_022790165.2Complete genome
4
SAMN13382581
2016-1178
Klebsiella pneumoniae
GCA_022789725.2Complete genome
6
SAMN17766472
2019-1459
Klebsiella pneumoniae
GCA_022789685.2Complete genome
7
SAMN17766475
2019-1497
Klebsiella pneumoniae
GCA_022789585.2Complete genome
8
SAMN17766480
2019-1766
Klebsiella pneumoniae
GCA_022789345.2Complete genome
1
SAMN17766494
2019-2186
Klebsiella pneumoniae
GCA_022789885.2Complete genome
5
SAMN17766463
2019-400-2
Klebsiella pneumoniae
GCA_022789905.2Complete genome
2
SAMN17766464
2019-604
Klebsiella pneumoniae
GCA_022789105.2Complete genome
3
SAMN17766508
2020-440
Klebsiella pneumoniae
GCA_022789985.2Complete genome
6
SAMN13382596
2016-1396
Klebsiella pneumoniae
GCA_022789975.2Complete genome
6
SAMN13382597
2016-1397
Klebsiella pneumoniae
GCA_022790445.2Complete genome
5
SAMN13382564
2016-563
Klebsiella pneumoniae
GCA_022790305.2Complete genome
7
SAMN13382572
2016-733
Klebsiella pneumoniae
GCA_022789805.2Complete genome
2
SAMN17766468
2019-1417-2
Klebsiella pneumoniae
GCA_022789185.2Complete genome
7
SAMN17766507
2020-428
Klebsiella pneumoniae
GCA_022818745.1ContigWPBG00000000
SAMN13382576
2016-873
Klebsiella quasipneumoniae subsp. similipneumoniae
GCA_022818715.1ContigJAFCPS000000000
SAMN17766474
2019-1496
Klebsiella quasipneumoniae subsp. similipneumoniae
GCA_022818685.1ContigWPAX00000000
SAMN13382585
2016-1214
Klebsiella quasipneumoniae subsp. similipneumoniae
GCA_022818625.1ContigJAFCOX000000000
SAMN17766495
2019-2196
Klebsiella quasipneumoniae subsp. similipneumoniae
GCA_022818615.1ContigJAFCPI000000000
SAMN17766484
2019-1836
Klebsiella quasipneumoniae subsp. quasipneumoniae
GCA_022818605.1ContigJAFCOU000000000
SAMN17766498
2019-2233
Klebsiella quasipneumoniae subsp. similipneumoniae
GCA_022818585.1ContigJAFCNZ000000000
SAMN17766519
2020-763
Klebsiella quasipneumoniae subsp. similipneumoniae
GCA_022818555.1ContigJAFCOT000000000
SAMN17766499
2019-2238
Klebsiella quasipneumoniae subsp. similipneumoniae
GCA_022818545.1ContigJAFCOM000000000
SAMN17766506
2020-427
Klebsiella quasipneumoniae subsp. similipneumoniae
GCA_022818525.1ContigJAFCOB000000000
SAMN17766517
2020-725
Klebsiella quasipneumoniae subsp. similipneumoniae
GCA_022818695.2Complete genome
9
SAMN17766469
2019-1434
Klebsiella quasivariicola
GCA_022818635.1ContigJAFCOR000000000
SAMN17766501
2020-312-2
Klebsiella variicola subsp. variicola
SRA Data Details
ParameterValue
Data volume, Gbases59
Data volume, Mbytes36717

Supplemental Content

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LinkOut to external resources

  • GOLD: Gp0684332 [Genomes On Line Database]
    GOLD: Gp0684332
    Genomes On Line Database
  • GOLD: Gp0684332 [Genomes On Line Database]
    GOLD: Gp0684332
    Genomes On Line Database

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