ID 1061121 - BioProject

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Accession: PRJNA1061121 ID: 1061121

Prevalence of antimicrobial resistance and virulence genes in E.coli from migratory birds in Inner Mongolia Plateau of northern China from 2018 to 2023

The aim of this work was to study on the pattern of trans-geographical transmission of antibiotic resistance and pathogenic Escherichia coli (E. More...

Accession	PRJNA1061121
Data Type	Genome sequencing and assembly
Scope	Multispecies
Submission	Registration date: 4-Jan-2024 Chinese Academy of Agric Sciences
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	79
Other datasets
BioSample	79
Assembly	79

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

79
79

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_036914635.1	JAYKVB000000000	SAMN39255636	23THG318EC	Escherichia coli
GCA_036914605.1	JAYKVC000000000	SAMN39255635	23THG276EC	Escherichia coli
GCA_036914595.1	JAYKVD000000000	SAMN39255634	23THG240EC	Escherichia coli
GCA_036914575.1	JAYKVA000000000	SAMN39255637	23THY17EC	Escherichia coli
GCA_036914555.1	JAYKUY000000000	SAMN39255639	23THY40EC	Escherichia coli
GCA_036914535.1	JAYKUZ000000000	SAMN39255638	23THY39EC	Escherichia coli
GCA_036914515.1	JAYKUX000000000	SAMN39255640	23THY47EC	Escherichia coli
GCA_036914495.1	JAYKUW000000000	SAMN39255641	23THY159EC	Escherichia coli
GCA_036914475.1	JAYKUV000000000	SAMN39255642	23THY257EC	Escherichia coli
GCA_036914435.1	JAYKUU000000000	SAMN39255643	23THY275EC	Escherichia coli
GCA_036914415.1	JAYKUR000000000	SAMN39255647	23NH-39EC	Escherichia coli
GCA_036914395.1	JAYKUT000000000	SAMN39255645	22YO-E14	Escherichia coli
GCA_036914375.1	JAYKUS000000000	SAMN39255646	23NH-10EC	Escherichia coli
GCA_036914355.1	JAYKUQ000000000	SAMN39255648	23NH-53EC	Escherichia coli
GCA_036914335.1	JAYKUP000000000	SAMN39255649	23YO-34EC	Escherichia coli
GCA_036914315.1	JAYKUO000000000	SAMN39255650	23YO-120EC	Escherichia coli
GCA_036914295.1	JAYKUN000000000	SAMN39255651	23YO-162EC	Escherichia coli
GCA_036914275.1	JAYKUM000000000	SAMN39255652	NH-190dc	Escherichia coli
GCA_036914255.1	JAYKUL000000000	SAMN39255653	NH-195dc	Escherichia coli
GCA_036914235.1	JAYKUK000000000	SAMN39255654	NH-223dc	Escherichia coli
GCA_036914195.1	JAYKUH000000000	SAMN39255657	NS-E189	Escherichia coli
GCA_036914215.1	JAYKUJ000000000	SAMN39255655	NS-359dc	Escherichia coli
GCA_036914175.1	JAYKUI000000000	SAMN39255656	NS-E186	Escherichia coli
GCA_036918355.1	JAYKVF000000000	SAMN39255632	23THG141EC	Escherichia coli
GCA_036918335.1	JAYKVE000000000	SAMN39255633	23THG175EC	Escherichia coli
GCA_036918315.1	JAYKVG000000000	SAMN39255631	23THG85EC	Escherichia coli
GCA_036919395.1	JAYKXF000000000	SAMN39255579	21PLY25dc	Escherichia coli
GCA_036919375.1	JAYKXE000000000	SAMN39255580	21QTXY41dc	Escherichia coli
GCA_036919355.1	JAYKXD000000000	SAMN39255581	21THG229dc	Escherichia coli
GCA_036919335.1	JAYKXA000000000	SAMN39255584	21ZN21dc	Escherichia coli
GCA_036919315.1	JAYKXB000000000	SAMN39255583	21ZN18dc	Escherichia coli
GCA_036919295.1	JAYKXC000000000	SAMN39255582	21THY231dc	Escherichia coli
GCA_036919275.1	JAYKWY000000000	SAMN39255587	21ZN35dc	Escherichia coli
GCA_036919255.1	JAYKWZ000000000	SAMN39255586	21ZN33dc	Escherichia coli
GCA_036919235.1	JAYKWT000000000	SAMN39255592	21ZN56dc	Escherichia coli
GCA_036919215.1	JAYKWW000000000	SAMN39255589	21ZN41dc	Escherichia coli
GCA_036919195.1	JAYKWV000000000	SAMN39255590	21ZN43dc	Escherichia coli
GCA_036919175.1	JAYKWX000000000	SAMN39255588	21ZN40dc	Escherichia coli
GCA_036919155.1	JAYKWU000000000	SAMN39255591	21ZN49dc	Escherichia coli
GCA_036919135.1	JAYKWQ000000000	SAMN39255595	21ZN70dc	Escherichia coli
GCA_036919115.1	JAYKWR000000000	SAMN39255594	21ZN60dc	Escherichia coli
GCA_036919095.1	JAYKWS000000000	SAMN39255593	21ZN57dc	Escherichia coli
GCA_036919065.1	JAYKWO000000000	SAMN39255597	21ZN94dc	Escherichia coli
GCA_036919055.1	JAYKWP000000000	SAMN39255596	21ZN71dc	Escherichia coli
GCA_036919035.1	JAYKWN000000000	SAMN39255598	21ZN95dc	Escherichia coli
GCA_036919015.1	JAYKWM000000000	SAMN39255599	21ZN96dc	Escherichia coli
GCA_036918995.1	JAYKWK000000000	SAMN39255601	21ZN101dc	Escherichia coli
GCA_036918975.1	JAYKWL000000000	SAMN39255600	21ZN98dc	Escherichia coli
GCA_036918955.1	JAYKWJ000000000	SAMN39255602	21ZN102dc	Escherichia coli
GCA_036918935.1	JAYKWI000000000	SAMN39255603	21ZN116dc	Escherichia coli
GCA_036918915.1	JAYKWG000000000	SAMN39255605	21ZN120dc	Escherichia coli
GCA_036918875.1	JAYKWH000000000	SAMN39255604	21ZN118dc	Escherichia coli
GCA_036918885.1	JAYKWF000000000	SAMN39255606	21ZN122dc	Escherichia coli
GCA_036918855.1	JAYKWD000000000	SAMN39255608	21ZN129dc	Escherichia coli
GCA_036918835.1	JAYKWE000000000	SAMN39255607	21ZN127dc	Escherichia coli
GCA_036918815.1	JAYKWB000000000	SAMN39255610	21ZN132dc	Escherichia coli
GCA_036918795.1	JAYKWC000000000	SAMN39255609	21ZN130dc	Escherichia coli
GCA_036918775.1	JAYKWA000000000	SAMN39255611	210311G10	Escherichia coli
GCA_036918755.1	JAYKVY000000000	SAMN39255613	210326G11	Escherichia coli
GCA_036918735.1	JAYKVZ000000000	SAMN39255612	210311G40	Escherichia coli
GCA_036918675.1	JAYKVV000000000	SAMN39255616	210326G31	Escherichia coli
GCA_036918715.1	JAYKVW000000000	SAMN39255615	210326G29	Escherichia coli
GCA_036918695.1	JAYKVX000000000	SAMN39255614	210326G14	Escherichia coli
GCA_036918655.1	JAYKVU000000000	SAMN39255617	210326Y14	Escherichia coli
GCA_036918635.1	JAYKVT000000000	SAMN39255618	22NPL-G111	Escherichia coli
GCA_036918615.1	JAYKVS000000000	SAMN39255619	22NPL-G122	Escherichia coli
GCA_036918595.1	JAYKVQ000000000	SAMN39255621	22NPL-G163	Escherichia coli
GCA_036918575.1	JAYKVR000000000	SAMN39255620	22NPL-G140	Escherichia coli
GCA_036918555.1	JAYKVP000000000	SAMN39255622	22NPL-Y117	Escherichia coli
GCA_036918535.1	JAYKVN000000000	SAMN39255624	22ZNG-131dc	Escherichia coli
GCA_036918515.1	JAYKVO000000000	SAMN39255623	22ZNG-108dc	Escherichia coli
GCA_036918495.1	JAYKVL000000000	SAMN39255626	22ZNG-217dc	Escherichia coli
GCA_036918475.1	JAYKVM000000000	SAMN39255625	22ZNG-214dc	Escherichia coli
GCA_036918455.1	JAYKVJ000000000	SAMN39255628	22ZNY-217dc	Escherichia coli
GCA_036918435.1	JAYKVI000000000	SAMN39255629	221ZNG-196dc	Escherichia coli
GCA_036918415.1	JAYKVK000000000	SAMN39255627	22ZNY-81dc	Escherichia coli
GCA_036918395.1	JAYKVH000000000	SAMN39255630	23THG52EC	Escherichia coli
GCA_036662535.1	JAZHSG000000000	SAMN39255585	21ZN23dc	Escherichia coli
GCA_036914445.1	JAZHLN000000000	SAMN39255644	22NH-E50	Escherichia marmotae

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Prevalence of antimicrobial resistance and virulence genes in E.coli from migratory birds in Inner Mongolia Plateau of northern China from 2018 to 2023

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