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Accession: PRJNA991232 ID: 991232

Bacterial whole genome sequencing

Bacterial whole genome sequencing Raw sequence reads

CDPHE bacterial whole genome seqeuncing for public health pathogen surveillance and outbreak investigation efforts
AccessionPRJNA991232
Data TypeGenome sequencing and assembly
ScopeMultispecies
SubmissionRegistration date: 4-Jul-2023
CDPHE SARS-CoV-2 submissions
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)26
SRA Experiments109
Other datasets
BioSample109
Assembly26
Assembly details:
Assembly levelNumber of Assemblies
26
26
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_036697785.1ContigJBAHWF000000000SAMN39937503
2024CJ-00025
GCA_036697775.1ContigJBAHWG000000000SAMN39937502
2024CJ-00024
GCA_036697755.1ContigJBAHWE000000000SAMN39937504
2024CJ-00026
GCA_036440495.1ContigJAZGUM000000000SAMN39733240
2024CJ-00013
GCA_036440505.1ContigJAZGUL000000000SAMN39733241
2024CJ-00014
GCA_036440425.1ContigJAZGUG000000000SAMN39729309
2024CJ-00009
GCA_036440395.1ContigJAZGUN000000000SAMN39733239
2024CJ-00012
GCA_036440365.1ContigJAZGTT000000000SAMN38348560
2023CJ-00358
GCA_036440355.1ContigJAZGTS000000000SAMN38348561
2023CJ-00359
GCA_036440335.1ContigJAZGTW000000000SAMN36839356
2023CJ-00273
GCA_036440295.1ContigJAZGTX000000000SAMN36839355
2023CJ-00272
GCA_036440305.1ContigJAZGTV000000000SAMN38348558
2023CJ-00356
GCA_036440255.1ContigJAZGTU000000000SAMN38348559
2023CJ-00357
GCA_036440265.1ContigJAZGUF000000000SAMN39729310
2024CJ-00010
GCA_036440115.1ContigJAZGUO000000000SAMN39733238
2024CJ-00011
GCA_036440125.1ContigJAZGTY000000000SAMN36839354
2023CJ-00271
GCA_036440065.1ContigJAZGTZ000000000SAMN36839353
2023CJ-00270
GCA_036440055.1ContigJAZGUA000000000SAMN36839352
2023CJ-00269
GCA_036440745.1ContigJAZGTR000000000SAMN38348562
2023CJ-00360
GCA_037478185.1ContigJBBHEB000000000SAMN40463050
2024CJ-00040
GCA_037478155.1ContigJBBHEC000000000SAMN40180242
2024CJ-00031
GCA_039756675.1ContigJBDLPG000000000SAMN41394298
2024CJ-00059
GCA_039408355.1ContigJBCIKO000000000SAMN41048441
2024CJ-00051
GCA_039408415.1ContigJBCIKP000000000SAMN41048442
2024CJ-00052
GCA_040104595.1ContigJBECZA000000000SAMN41574054
2024CJ-00067
GCA_040104695.1ContigJBECZB000000000SAMN41574053
2024CJ-00066
SRA Data Details
ParameterValue
Data volume, Gbases61
Data volume, Mbytes26748

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