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Links from Nucleotide

Accession: PRJNA981498 ID: 981498

Invasive Serratia marcescens Infections Outbreak Among Incarcerated Persons at a California State Prison, March 2020 to December 2022

California prison outbreak investigation
AccessionPRJNA981498
Data TypeGenome sequencing and assembly
ScopeMultispecies
SubmissionRegistration date: 8-Jun-2023
California Department of Public Health
Relevancepublic health
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)60
SRA Experiments60
Other datasets
BioSample60
Assembly60
Assembly details:
Assembly levelNumber of Assemblies
60
60
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_030771905.1ScaffoldJAUJWT000000000SAMN35676882
PatientA
GCA_030771875.1ScaffoldJAUJWS000000000SAMN35676898
PatientL
GCA_030771855.1ScaffoldJAUJWR000000000SAMN35676899
PatientM
GCA_030771835.1ScaffoldJAUJWQ000000000SAMN35676900
PatientN
GCA_030771815.1ScaffoldJAUJWP000000000SAMN35676901
PatientO
GCA_030771795.1ScaffoldJAUJWO000000000SAMN35676902
PatientP
GCA_030771775.1ScaffoldJAUJWN000000000SAMN35676904
PatientR
GCA_030771755.1ScaffoldJAUJWM000000000SAMN35676903
PatientQ
GCA_030771735.1ScaffoldJAUJWL000000000SAMN35676896
PatientJ
GCA_030771715.1ScaffoldJAUJWK000000000SAMN35676905
PatientS
GCA_030771665.1ScaffoldJAUJWJ000000000SAMN35676883
PatientB-1
GCA_030771685.1ScaffoldJAUJWH000000000SAMN35676885
PatientB-3
GCA_030771655.1ScaffoldJAUJWI000000000SAMN35676884
PatientB-2
GCA_030771635.1ScaffoldJAUJWG000000000SAMN35676886
PatientD-1
GCA_030771615.1ScaffoldJAUJWE000000000SAMN35676888
PatientE
GCA_030771595.1ScaffoldJAUJWF000000000SAMN35676887
PatientD-2
GCA_030771575.1ScaffoldJAUJWD000000000SAMN35676889
PatientF
GCA_030771545.1ScaffoldJAUJWB000000000SAMN35676891
PatientH-1
GCA_030771535.1ScaffoldJAUJWC000000000SAMN35676890
PatientG
GCA_030771495.1ScaffoldJAUJVY000000000SAMN35676894
PatientH-4
GCA_030771505.1ScaffoldJAUJWA000000000SAMN35676892
PatientH-2
GCA_030771475.1ScaffoldJAUJVZ000000000SAMN35676893
PatientH-3
GCA_030770855.1ScaffoldJAUJUT000000000SAMN35676934
SampleR
GCA_030770835.1ScaffoldJAUJUS000000000SAMN35676935
SampleS
GCA_030770815.1ScaffoldJAUJUR000000000SAMN35676936
SampleT
GCA_030770795.1ScaffoldJAUJUQ000000000SAMN35676937
SampleU
GCA_030770775.1ScaffoldJAUJUP000000000SAMN35676938
SampleV
GCA_030770755.1ScaffoldJAUJUO000000000SAMN35676939
SampleW
GCA_030770735.1ScaffoldJAUJUN000000000SAMN35676940
SampleY
GCA_030770715.1ScaffoldJAUJUM000000000SAMN35676941
SampleZ
GCA_030771455.1ScaffoldJAUJVX000000000SAMN35676895
PatientI
GCA_030771425.1ScaffoldJAUJVW000000000SAMN35676897
PatientK
GCA_030771415.1ScaffoldJAUJVV000000000SAMN35676907
SampleA-2
GCA_030771395.1ScaffoldJAUJVU000000000SAMN35676908
SampleA-3
GCA_030771365.1ScaffoldJAUJVT000000000SAMN35676906
SampleA-1
GCA_030771355.1ScaffoldJAUJVS000000000SAMN35676909
SampleAA
GCA_030771335.1ScaffoldJAUJVR000000000SAMN35676910
SampleAB
GCA_030771315.1ScaffoldJAUJVQ000000000SAMN35676911
SampleB
GCA_030771295.1ScaffoldJAUJVP000000000SAMN35676912
SampleC
GCA_030771275.1ScaffoldJAUJVO000000000SAMN35676914
SampleD-2
GCA_030771255.1ScaffoldJAUJVN000000000SAMN35676913
SampleD-1
GCA_030771235.1ScaffoldJAUJVM000000000SAMN35676915
SampleE-1
GCA_030771215.1ScaffoldJAUJVL000000000SAMN35676916
SampleE-2
GCA_030771195.1ScaffoldJAUJVK000000000SAMN35676917
SampleF
GCA_030771175.1ScaffoldJAUJVJ000000000SAMN35676918
SampleG
GCA_030771155.1ScaffoldJAUJVI000000000SAMN35676919
SampleH
GCA_030771135.1ScaffoldJAUJVH000000000SAMN35676920
SampleI-1
GCA_030771115.1ScaffoldJAUJVG000000000SAMN35676921
SampleI-2
GCA_030771095.1ScaffoldJAUJVF000000000SAMN35676922
SampleI-3
GCA_030771075.1ScaffoldJAUJVD000000000SAMN35676924
SampleI-5
GCA_030771055.1ScaffoldJAUJVE000000000SAMN35676923
SampleI-4
GCA_030771035.1ScaffoldJAUJVC000000000SAMN35676925
SampleJ
GCA_030771005.1ScaffoldJAUJVA000000000SAMN35676927
SampleL
GCA_030770995.1ScaffoldJAUJVB000000000SAMN35676926
SampleK
GCA_030770965.1ScaffoldJAUJUZ000000000SAMN35676929
SampleM-2
GCA_030770955.1ScaffoldJAUJUY000000000SAMN35676928
SampleM-1
GCA_030770935.1ScaffoldJAUJUX000000000SAMN35676930
SampleN
GCA_030770915.1ScaffoldJAUJUW000000000SAMN35676931
SampleO
GCA_030770895.1ScaffoldJAUJUV000000000SAMN35676932
SampleP
GCA_030770875.1ScaffoldJAUJUU000000000SAMN35676933
SampleQ
SRA Data Details
ParameterValue
Data volume, Gbases66
Data volume, Mbytes41522

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