U.S. flag

An official website of the United States government

Display Settings:

Format

Send to:

Choose Destination

Links from Nucleotide

Accession: PRJEB56771 ID: 891609

EMG produced TPA metagenomics assembly of PRJNA797778 data set (Vaginal Microbiome Research Consortium).

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA797778, and was assembled with metaSPAdes v3. More...
AccessionPRJEB56771
Data TypeGenome sequencing and assembly
ScopeMonoisolate
KeywordTPA:assembly
PublicationsMitchell AL et al., "EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.", Nucleic Acids Res, 2018 Jan 4;46(D1):D726-D735
SubmissionRegistration date: 18-Oct-2022
EMG
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)14494
WGS master321
Publications
PubMed1
PMC1
Other datasets
BioSample321
Assembly321
Assembly details:
Assembly levelNumber of Assemblies
321
321
AssemblyLevelWGSBioSampleTaxonomy
GCA_947254865.1ContigCAMYEQ000000000SAMEA111539085
GCA_947254515.1ContigCAMYEG000000000SAMEA111539055
GCA_947253365.1ContigCAMXYX000000000SAMEA111539272
GCA_947254275.1ContigCAMYCL000000000SAMEA111539269
GCA_947253965.1ContigCAMYBE000000000SAMEA111539192
GCA_947253975.1ContigCAMYBK000000000SAMEA111539178
GCA_947255185.1ContigCAMYGA000000000SAMEA111539165
GCA_947292495.1ContigCAMYPQ000000000SAMEA111539148
GCA_947254695.1ContigCAMYCS000000000SAMEA111539306
GCA_947252355.1ContigCAMXVE000000000SAMEA111539050
GCA_947253375.1ContigCAMXZC000000000SAMEA111539260
GCA_947253505.1ContigCAMXZL000000000SAMEA111539049
GCA_947253635.1ContigCAMYAD000000000SAMEA111539173
GCA_947253775.1ContigCAMYAL000000000SAMEA111539011
GCA_947255055.1ContigCAMYFO000000000SAMEA111539313
GCA_947283735.1ContigCAMYOV000000000SAMEA111539298
GCA_947253145.1ContigCAMXYP000000000SAMEA111539081
GCA_947253295.1ContigCAMXYB000000000SAMEA111539080
GCA_947253785.1ContigCAMYAV000000000SAMEA111539019
GCA_947255025.1ContigCAMYFN000000000SAMEA111539151
GCA_947252585.1ContigCAMXWB000000000SAMEA111539243
GCA_947254285.1ContigCAMYCR000000000SAMEA111539023
GCA_947255125.1ContigCAMYFU000000000SAMEA111539161
GCA_947252405.1ContigCAMXVP000000000SAMEA111539136
GCA_947293915.1ContigCAMYPW000000000SAMEA111539152
GCA_947254485.1ContigCAMYER000000000SAMEA111539097
GCA_947254155.1ContigCAMYCO000000000SAMEA111539061
GCA_947253695.1ContigCAMYAJ000000000SAMEA111539117
GCA_947254015.1ContigCAMYBR000000000SAMEA111539303
GCA_947252995.1ContigCAMXXH000000000SAMEA111539060
GCA_947254495.1ContigCAMYEN000000000SAMEA111539062
GCA_947252715.1ContigCAMXVV000000000SAMEA111539231
GCA_947252495.1ContigCAMXVX000000000SAMEA111539017
GCA_947254475.1ContigCAMYET000000000SAMEA111539296
GCA_947254435.1ContigCAMYDJ000000000SAMEA111539297
GCA_947252475.1ContigCAMXVL000000000SAMEA111539120
GCA_947254305.1ContigCAMYCU000000000SAMEA111539268
GCA_947254855.1ContigCAMYEF000000000SAMEA111539122
GCA_947254255.1ContigCAMYDD000000000SAMEA111539228
GCA_947254395.1ContigCAMYDC000000000SAMEA111539114
GCA_947252815.1ContigCAMXXP000000000SAMEA111539013
GCA_947252335.1ContigCAMXVD000000000SAMEA111539255
GCA_947252945.1ContigCAMXXU000000000SAMEA111539065
GCA_947253355.1ContigCAMXYW000000000SAMEA111539036
GCA_947252735.1ContigCAMXWT000000000SAMEA111539090
GCA_947252875.1ContigCAMXWH000000000SAMEA111539035
GCA_947253645.1ContigCAMYAC000000000SAMEA111539083
GCA_947252425.1ContigCAMXVJ000000000SAMEA111539166
GCA_947252625.1ContigCAMXWD000000000SAMEA111539190
GCA_947252535.1ContigCAMXYC000000000SAMEA111539048
GCA_947252705.1ContigCAMXXG000000000SAMEA111539326
GCA_947253525.1ContigCAMXZO000000000SAMEA111539315
GCA_947254775.1ContigCAMYDM000000000SAMEA111539047
GCA_947253435.1ContigCAMXZJ000000000SAMEA111539213
GCA_947253605.1ContigCAMXZT000000000SAMEA111539086
GCA_947289485.1ContigCAMYPK000000000SAMEA111539131
GCA_947292095.1ContigCAMYPO000000000SAMEA111539220
GCA_947255145.1ContigCAMYFX000000000SAMEA111539163
GCA_947254795.1ContigCAMYDK000000000SAMEA111539034
GCA_947254735.1ContigCAMYDA000000000SAMEA111539321
GCA_947254105.1ContigCAMYBW000000000SAMEA111539129
GCA_947254655.1ContigCAMYDZ000000000SAMEA111539294
GCA_947254135.1ContigCAMYCY000000000SAMEA111539247
GCA_947253895.1ContigCAMYAR000000000SAMEA111539101
GCA_947252795.1ContigCAMXXA000000000SAMEA111539113
GCA_947253925.1ContigCAMYBI000000000SAMEA111539099
GCA_947253835.1ContigCAMYBD000000000SAMEA111539112
GCA_947252395.1ContigCAMXVR000000000SAMEA111539045
GCA_947252575.1ContigCAMXWP000000000SAMEA111539203
GCA_947254215.1ContigCAMYCT000000000SAMEA111539106
GCA_947253705.1ContigCAMYAI000000000SAMEA111539014
GCA_947252595.1ContigCAMXWC000000000SAMEA111539179
GCA_947253905.1ContigCAMYBL000000000SAMEA111539069
GCA_947254935.1ContigCAMYFC000000000SAMEA111539154
GCA_947253985.1ContigCAMYBG000000000SAMEA111539239
GCA_947254715.1ContigCAMYDF000000000SAMEA111539007
GCA_947254835.1ContigCAMYEH000000000SAMEA111539244
GCA_947289445.1ContigCAMYPI000000000SAMEA111539320
GCA_947253575.1ContigCAMXZQ000000000SAMEA111539084
GCA_947253265.1ContigCAMXXQ000000000SAMEA111539319
GCA_947254995.1ContigCAMYFJ000000000SAMEA111539285
GCA_947253385.1ContigCAMXYU000000000SAMEA111539307
GCA_947252835.1ContigCAMXWM000000000SAMEA111539091
GCA_947254455.1ContigCAMYDX000000000SAMEA111539176
GCA_947254225.1ContigCAMYCK000000000SAMEA111539008
GCA_947254315.1ContigCAMYCN000000000SAMEA111539302
GCA_947254325.1ContigCAMYCC000000000SAMEA111539089
GCA_947252855.1ContigCAMXXJ000000000SAMEA111539032
GCA_947252955.1ContigCAMXXR000000000SAMEA111539070
GCA_947252885.1ContigCAMXXC000000000SAMEA111539275
GCA_947254445.1ContigCAMYEK000000000SAMEA111539184
GCA_947253185.1ContigCAMXYF000000000SAMEA111539189
GCA_947254635.1ContigCAMYEL000000000SAMEA111539226
GCA_947253675.1ContigCAMYAH000000000SAMEA111539018
GCA_947253315.1ContigCAMXYL000000000SAMEA111539071
GCA_947254145.1ContigCAMYCV000000000SAMEA111539092
GCA_947285585.1ContigCAMYPA000000000SAMEA111539043
GCA_947294845.1ContigCAMYPX000000000SAMEA111539054
GCA_947252635.1ContigCAMXWA000000000SAMEA111539188
GCA_947253485.1ContigCAMXZK000000000SAMEA111539024
GCA_947292345.1ContigCAMYPP000000000SAMEA111539240
GCA_947293765.1ContigCAMYPU000000000SAMEA111539066
GCA_947253825.1ContigCAMYAZ000000000SAMEA111539196
GCA_947253115.1ContigCAMXYO000000000SAMEA111539174
GCA_947254055.1ContigCAMYDH000000000SAMEA111539300
GCA_947254985.1ContigCAMYFH000000000SAMEA111539038
GCA_947253095.1ContigCAMXYA000000000SAMEA111539205
GCA_947254575.1ContigCAMYDY000000000SAMEA111539219
GCA_947253205.1ContigCAMXYN000000000SAMEA111539227
GCA_947252555.1ContigCAMXXD000000000SAMEA111539251
GCA_947254295.1ContigCAMYCQ000000000SAMEA111539027
GCA_947253085.1ContigCAMXXW000000000SAMEA111539040
GCA_947253725.1ContigCAMYAW000000000SAMEA111539134
GCA_947255155.1ContigCAMYFY000000000SAMEA111539147
GCA_947255075.1ContigCAMYFS000000000SAMEA111539168
GCA_947252615.1ContigCAMXVZ000000000SAMEA111539271
GCA_947254125.1ContigCAMYCH000000000SAMEA111539182
GCA_947254785.1ContigCAMYDT000000000SAMEA111539201
GCA_947254615.1ContigCAMYEC000000000SAMEA111539051
GCA_947254955.1ContigCAMYFE000000000SAMEA111539169
GCA_947292485.1ContigCAMYPR000000000SAMEA111539236
GCA_947254825.1ContigCAMYDO000000000SAMEA111539324
GCA_947252845.1ContigCAMXXL000000000SAMEA111539323
GCA_947252925.1ContigCAMXWL000000000SAMEA111539123
GCA_947252965.1ContigCAMXXZ000000000SAMEA111539217
GCA_947252695.1ContigCAMXVO000000000SAMEA111539312
GCA_947253535.1ContigCAMXZX000000000SAMEA111539222
GCA_947253035.1ContigCAMXXI000000000SAMEA111539322
GCA_947253335.1ContigCAMXZD000000000SAMEA111539291
GCA_947255135.1ContigCAMYFW000000000SAMEA111539058
GCA_947254685.1ContigCAMYCW000000000SAMEA111539250
GCA_947254875.1ContigCAMYDV000000000SAMEA111539171
GCA_947254545.1ContigCAMYEB000000000SAMEA111539210
GCA_947254755.1ContigCAMYDQ000000000SAMEA111539046
GCA_947289505.1ContigCAMYPL000000000SAMEA111539105
GCA_947254565.1ContigCAMYEO000000000SAMEA111539278
GCA_947254845.1ContigCAMYEE000000000SAMEA111539119
GCA_947253585.1ContigCAMXZS000000000SAMEA111539053
GCA_947252485.1ContigCAMXVN000000000SAMEA111539258
GCA_947254235.1ContigCAMYBZ000000000SAMEA111539116
GCA_947277665.1ContigCAMYOQ000000000SAMEA111539242
GCA_947253225.1ContigCAMXYR000000000SAMEA111539128
GCA_947253855.1ContigCAMYBH000000000SAMEA111539115
GCA_947253025.1ContigCAMXYI000000000SAMEA111539262
GCA_947253055.1ContigCAMXYE000000000SAMEA111539139
GCA_947253545.1ContigCAMXZV000000000SAMEA111539194
GCA_947252465.1ContigCAMXVK000000000SAMEA111539281
GCA_947252825.1ContigCAMXWG000000000SAMEA111539127
GCA_947252455.1ContigCAMXVQ000000000SAMEA111539283
GCA_947254885.1ContigCAMYEX000000000SAMEA111539310
GCA_947252445.1ContigCAMXVH000000000SAMEA111539133
GCA_947253105.1ContigCAMXXK000000000SAMEA111539079
GCA_947253715.1ContigCAMYAN000000000SAMEA111539254
GCA_947252725.1ContigCAMXWY000000000SAMEA111539087
GCA_947255115.1ContigCAMYFV000000000SAMEA111539158
GCA_947254815.1ContigCAMYDN000000000SAMEA111539206
GCA_947253655.1ContigCAMYAE000000000SAMEA111539010
GCA_947253935.1ContigCAMYBF000000000SAMEA111539186
GCA_947253745.1ContigCAMYAQ000000000SAMEA111539256
GCA_947253325.1ContigCAMXYM000000000SAMEA111539191
GCA_947290775.1ContigCAMYPM000000000SAMEA111539246
GCA_947252645.1ContigCAMXWF000000000SAMEA111539016
GCA_947253005.1ContigCAMXXT000000000SAMEA111539064
GCA_947253155.1ContigCAMXYK000000000SAMEA111539279
GCA_947254805.1ContigCAMYDP000000000SAMEA111539041
GCA_947255065.1ContigCAMYFT000000000SAMEA111539286
GCA_947254415.1ContigCAMYDU000000000SAMEA111539259
GCA_947253475.1ContigCAMXZU000000000SAMEA111539153
GCA_947254065.1ContigCAMYBQ000000000SAMEA111539095
GCA_947255175.1ContigCAMYGB000000000SAMEA111539149
GCA_947255105.1ContigCAMYFP000000000SAMEA111539029
GCA_947253565.1ContigCAMXZZ000000000SAMEA111539157
GCA_947253285.1ContigCAMXXV000000000SAMEA111539078
GCA_947253945.1ContigCAMYAY000000000SAMEA111539221
GCA_947253405.1ContigCAMXZF000000000SAMEA111539265
GCA_947253955.1ContigCAMYAX000000000SAMEA111539102
GCA_947253995.1ContigCAMYBM000000000SAMEA111539110
GCA_947253235.1ContigCAMXZA000000000SAMEA111539209
GCA_947254355.1ContigCAMYCG000000000SAMEA111539109
GCA_947254025.1ContigCAMYBS000000000SAMEA111539026
GCA_947254265.1ContigCAMYCB000000000SAMEA111539233
GCA_947255045.1ContigCAMYFM000000000SAMEA111539030
GCA_947254895.1ContigCAMYEY000000000SAMEA111539274
GCA_947254965.1ContigCAMYFG000000000SAMEA111539293
GCA_947282845.1ContigCAMYOT000000000SAMEA111539056
GCA_947252505.1ContigCAMXWE000000000SAMEA111539195
GCA_947253445.1ContigCAMXZN000000000SAMEA111539121
GCA_947254675.1ContigCAMYEA000000000SAMEA111539057
GCA_947253755.1ContigCAMYAS000000000SAMEA111539299
GCA_947253135.1ContigCAMXYS000000000SAMEA111539276
GCA_947253885.1ContigCAMYAO000000000SAMEA111539100
GCA_947292705.1ContigCAMYPS000000000SAMEA111539238
GCA_947253805.1ContigCAMYBA000000000SAMEA111539077
GCA_947252665.1ContigCAMXVY000000000SAMEA111539181
GCA_947255015.1ContigCAMYFK000000000SAMEA111539037
GCA_947285205.1ContigCAMYOY000000000SAMEA111539160
GCA_947289355.1ContigCAMYPJ000000000SAMEA111539267
GCA_947254405.1ContigCAMYDB000000000SAMEA111539150
GCA_947255095.1ContigCAMYFR000000000SAMEA111539288
GCA_947254175.1ContigCAMYBY000000000SAMEA111539237
GCA_947254335.1ContigCAMYCM000000000SAMEA111539241
GCA_947254195.1ContigCAMYCD000000000SAMEA111539235
GCA_947255215.1ContigCAMYGE000000000SAMEA111539137
GCA_947253915.1ContigCAMYBJ000000000SAMEA111539067
GCA_947252805.1ContigCAMXWO000000000SAMEA111539287
GCA_947255035.1ContigCAMYFL000000000SAMEA111539308
GCA_947254505.1ContigCAMYES000000000SAMEA111539104
GCA_947253245.1ContigCAMXZB000000000SAMEA111539068
GCA_947253415.1ContigCAMXZG000000000SAMEA111539266
GCA_947252565.1ContigCAMXWN000000000SAMEA111539261
GCA_947253845.1ContigCAMYBC000000000SAMEA111539234
GCA_947252435.1ContigCAMXVI000000000SAMEA111539270
GCA_947253065.1ContigCAMXWS000000000SAMEA111539096
GCA_947254005.1ContigCAMYBN000000000SAMEA111539118
GCA_947252755.1ContigCAMXWV000000000SAMEA111539094
GCA_947289035.1ContigCAMYPF000000000SAMEA111539253
GCA_947293975.1ContigCAMYPV000000000SAMEA111539145
GCA_947255195.1ContigCAMYGC000000000SAMEA111539156
GCA_947252545.1ContigCAMXXN000000000SAMEA111539273
GCA_947253875.1ContigCAMYAM000000000SAMEA111539140
GCA_947254385.1ContigCAMYCP000000000SAMEA111539248
GCA_947252345.1ContigCAMXVC000000000SAMEA111539144
GCA_947252385.1ContigCAMXVM000000000SAMEA111539021
GCA_947255205.1ContigCAMYGD000000000SAMEA111539167
GCA_947254365.1ContigCAMYDG000000000SAMEA111539126
GCA_947254425.1ContigCAMYCI000000000SAMEA111539304
GCA_947280595.1ContigCAMYOS000000000SAMEA111539290
GCA_947292085.1ContigCAMYPN000000000SAMEA111539218
GCA_947289115.1ContigCAMYPG000000000SAMEA111539305
GCA_947284275.1ContigCAMYOX000000000SAMEA111539033
GCA_947252605.1ContigCAMXXS000000000SAMEA111539125
GCA_947252975.1ContigCAMXWX000000000SAMEA111539175
GCA_947254595.1ContigCAMYED000000000SAMEA111539211
GCA_947254465.1ContigCAMYEU000000000SAMEA111539207
GCA_947253515.1ContigCAMXZY000000000SAMEA111539052
GCA_947254045.1ContigCAMYBO000000000SAMEA111539130
GCA_947253865.1ContigCAMYAP000000000SAMEA111539135
GCA_947253305.1ContigCAMXYZ000000000SAMEA111539224
GCA_947285985.1ContigCAMYPB000000000SAMEA111539162
GCA_947252375.1ContigCAMXVF000000000SAMEA111539204
GCA_947252515.1ContigCAMXXF000000000SAMEA111539197
GCA_947254185.1ContigCAMYDI000000000SAMEA111539088
GCA_947254605.1ContigCAMYDS000000000SAMEA111539006
GCA_947284095.1ContigCAMYOW000000000SAMEA111539311
GCA_947252915.1ContigCAMXWI000000000SAMEA111539074
GCA_947252685.1ContigCAMXVW000000000SAMEA111539316
GCA_947252765.1ContigCAMXXX000000000SAMEA111539108
GCA_947252865.1ContigCAMXVU000000000SAMEA111539263
GCA_947253015.1ContigCAMXXO000000000SAMEA111539284
GCA_947253555.1ContigCAMXZW000000000SAMEA111539232
GCA_947253215.1ContigCAMXYQ000000000SAMEA111539107
GCA_947252415.1ContigCAMXVT000000000SAMEA111539309
GCA_947253455.1ContigCAMXZP000000000SAMEA111539059
GCA_947252745.1ContigCAMXWW000000000SAMEA111539111
GCA_947253045.1ContigCAMXYV000000000SAMEA111539042
GCA_947254725.1ContigCAMYCZ000000000SAMEA111539198
GCA_947254525.1ContigCAMYEP000000000SAMEA111539063
GCA_947253255.1ContigCAMXXY000000000SAMEA111539325
GCA_947254375.1ContigCAMYCF000000000SAMEA111539249
GCA_947254095.1ContigCAMYBV000000000SAMEA111539025
GCA_947253495.1ContigCAMXZM000000000SAMEA111539225
GCA_947253395.1ContigCAMXYY000000000SAMEA111539142
GCA_947253595.1ContigCAMXZR000000000SAMEA111539245
GCA_947254645.1ContigCAMYDW000000000SAMEA111539214
GCA_947252785.1ContigCAMXWZ000000000SAMEA111539229
GCA_947253795.1ContigCAMYAT000000000SAMEA111539183
GCA_947253685.1ContigCAMYAG000000000SAMEA111539223
GCA_947254665.1ContigCAMYEJ000000000SAMEA111539215
GCA_947289175.1ContigCAMYPH000000000SAMEA111539257
GCA_947285475.1ContigCAMYOZ000000000SAMEA111539193
GCA_947283485.1ContigCAMYOU000000000SAMEA111539141
GCA_947253425.1ContigCAMXZH000000000SAMEA111539216
GCA_947253625.1ContigCAMYAB000000000SAMEA111539155
GCA_947253195.1ContigCAMXXM000000000SAMEA111539138
GCA_947252895.1ContigCAMXYT000000000SAMEA111539202
GCA_947254345.1ContigCAMYCJ000000000SAMEA111539124
GCA_947254745.1ContigCAMYDR000000000SAMEA111539200
GCA_947254905.1ContigCAMYFA000000000SAMEA111539280
GCA_947254115.1ContigCAMYBX000000000SAMEA111539301
GCA_947254915.1ContigCAMYEZ000000000SAMEA111539317
GCA_947254585.1ContigCAMYEM000000000SAMEA111539098
GCA_947254535.1ContigCAMYEI000000000SAMEA111539172
GCA_947292795.1ContigCAMYPT000000000SAMEA111539022
GCA_947252655.1ContigCAMXWR000000000SAMEA111539318
GCA_947252775.1ContigCAMXXB000000000SAMEA111539076
GCA_947254555.1ContigCAMYEW000000000SAMEA111539187
GCA_947254245.1ContigCAMYCA000000000SAMEA111539082
GCA_947252905.1ContigCAMXWK000000000SAMEA111539075
GCA_947253465.1ContigCAMXZI000000000SAMEA111539170
GCA_947253815.1ContigCAMYBB000000000SAMEA111539073
GCA_947252935.1ContigCAMXXE000000000SAMEA111539208
GCA_947254085.1ContigCAMYBT000000000SAMEA111539252
GCA_947254205.1ContigCAMYCE000000000SAMEA111539230
GCA_947254035.1ContigCAMYBU000000000SAMEA111539009
GCA_947254925.1ContigCAMYFB000000000SAMEA111539282
GCA_947254765.1ContigCAMYDL000000000SAMEA111539015
GCA_947254975.1ContigCAMYFF000000000SAMEA111539164
GCA_947252365.1ContigCAMXVG000000000SAMEA111539292
GCA_947253345.1ContigCAMXZE000000000SAMEA111539289
GCA_947252985.1ContigCAMXWQ000000000SAMEA111539177
GCA_947254625.1ContigCAMYEV000000000SAMEA111539295
GCA_947254945.1ContigCAMYFD000000000SAMEA111539314
GCA_947253175.1ContigCAMXYG000000000SAMEA111539072
GCA_947253615.1ContigCAMYAA000000000SAMEA111539103
GCA_947255005.1ContigCAMYFI000000000SAMEA111539277
GCA_947286155.1ContigCAMYPD000000000SAMEA111539093
GCA_947254075.1ContigCAMYBP000000000SAMEA111539132
GCA_947278105.1ContigCAMYOR000000000SAMEA111539020
GCA_947253275.1ContigCAMXYJ000000000SAMEA111539012
GCA_947252675.1ContigCAMXWJ000000000SAMEA111539044
GCA_947253765.1ContigCAMYAK000000000SAMEA111539143
GCA_947255165.1ContigCAMYFZ000000000SAMEA111539028
GCA_947253735.1ContigCAMYAU000000000SAMEA111539264
GCA_947253665.1ContigCAMYAF000000000SAMEA111539159
GCA_947253125.1ContigCAMXYD000000000SAMEA111539212
GCA_947253075.1ContigCAMXWU000000000SAMEA111539039
GCA_947253165.1ContigCAMXYH000000000SAMEA111539185
GCA_947252525.1ContigCAMXVS000000000SAMEA111539199
GCA_947254705.1ContigCAMYCX000000000SAMEA111539146
GCA_947255085.1ContigCAMYFQ000000000SAMEA111539031
GCA_947254165.1ContigCAMYDE000000000SAMEA111539180

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center