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Accession: PRJNA319593 ID: 319593

Salmonella enterica

GenomeTrakr project: Salmonella enterica, MDU PHL, Australia

See Genome Information for Salmonella enterica
Whole genome sequencing of Salmonella enterica isolates as part of MDU PHL routine surveillance activities
AccessionPRJNA319593
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismSalmonella enterica[Taxonomy ID: 28901]
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
SubmissionRegistration date: 5-Jul-2019
Microbiological Diagnostics Unit
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)2973
WGS master2954
Genomic DNA19
SRA Experiments2987
Protein Sequences64745
Other datasets
BioSample2972
Assembly2969
Assembly details:
Assembly levelNumber of Assemblies
15
2954
2969
AssemblyLevelWGSChrsBioSampleInfraspecies IdTaxonomy
GCA_030867525.1Complete genomeSAMN24255019
AUSMDU00036192
GCA_006684005.1ContigAAFYWF000000000
SAMN10742213
AUSMDU00022047
GCA_029225745.1Complete genomeSAMN24255096
AUSMDU00051359
GCA_029225705.1Complete genomeSAMN24255097
AUSMDU00051360
GCA_029225665.1Complete genomeSAMN24255099
AUSMDU00052066
GCA_029225605.1Complete genomeSAMN24255102
AUSMDU00052071
GCA_029748255.1Complete genomeSAMN24255092
AUSMDU00021620
GCA_029748135.1Complete genomeSAMN24255093
AUSMDU00021621
GCA_029748105.1Complete genomeSAMN24254903
AUSMDU00022461
GCA_029748085.1Complete genomeSAMN24255041
AUSMDU00036581
GCA_029748065.1Complete genomeSAMN24255067
AUSMDU00049302
GCA_029748045.1Complete genomeSAMN24255070
AUSMDU00049305
GCA_029748025.1Complete genomeSAMN24255072
AUSMDU00049308
GCA_029748005.1Complete genomeSAMN24255077
AUSMDU00049314
GCA_029468965.1ContigABLFXF000000000
SAMN18618285
AUSMDU00004863
GCA_029497845.1ContigABLGOU000000000
SAMN18618275
AUSMDU00004861
GCA_029497865.1ContigABLGOX000000000
SAMN18618341
AUSMDU00004867
GCA_029497825.1ContigABLGOW000000000
SAMN18618327
AUSMDU00004864
GCA_029497805.1ContigABLGOV000000000
SAMN18618326
AUSMDU00004865
GCA_029692165.1Complete genomeSAMN24255094
AUSMDU00051266
GCA_023333905.1ContigABGDQL000000000
SAMN24254914
AUSMDU00022472
GCA_023333465.1ContigABGDQJ000000000
SAMN24255001
AUSMDU00036026
GCA_023333445.1ContigABGDQI000000000
SAMN24255000
AUSMDU00036025
GCA_023333425.1ContigABGDQK000000000
SAMN24255002
AUSMDU00036027
GCA_023333405.1ContigABGDQH000000000
SAMN24254999
AUSMDU00036024
GCA_023333325.1ContigABGDQG000000000
SAMN24254998
AUSMDU00036023
GCA_023333165.1ContigABGDPW000000000
SAMN24254931
AUSMDU00022489
GCA_023333135.1ContigABGDPV000000000
SAMN24254929
AUSMDU00022487
GCA_023333125.1ContigABGDPU000000000
SAMN24254930
AUSMDU00022488
GCA_023333105.1ContigABGDPT000000000
SAMN24254928
AUSMDU00022486
GCA_023333085.1ContigABGDPR000000000
SAMN24254926
AUSMDU00022484
GCA_023333065.1ContigABGDPS000000000
SAMN24254927
AUSMDU00022485
GCA_023333045.1ContigABGDPP000000000
SAMN24254924
AUSMDU00022482
GCA_023333025.1ContigABGDPQ000000000
SAMN24254925
AUSMDU00022483
GCA_023333005.1ContigABGDPO000000000
SAMN24255090
AUSMDU00049498
GCA_023332985.1ContigABGDPN000000000
SAMN24255089
AUSMDU00049497
GCA_023332965.1ContigABGDPM000000000
SAMN24254923
AUSMDU00022481
GCA_023332945.1ContigABGDPL000000000
SAMN24254905
AUSMDU00022463
GCA_023332925.1ContigABGDPK000000000
SAMN24255087
AUSMDU00049495
GCA_023332905.1ContigABGDPJ000000000
SAMN24255086
AUSMDU00049494
GCA_023332885.1ContigABGDPI000000000
SAMN24255085
AUSMDU00049493
GCA_023332865.1ContigABGDPG000000000
SAMN24255083
AUSMDU00049491
GCA_023332845.1ContigABGDPH000000000
SAMN24255084
AUSMDU00049492
GCA_023332805.1ContigABGDPE000000000
SAMN24255081
AUSMDU00049488
GCA_023332825.1ContigABGDPF000000000
SAMN24255082
AUSMDU00049490
GCA_023332775.1ContigABGDPB000000000
SAMN24254922
AUSMDU00022480
GCA_023332765.1ContigABGDPC000000000
SAMN24255079
AUSMDU00049316
GCA_023332725.1ContigABGDPA000000000
SAMN24255078
AUSMDU00049315
GCA_023332745.1ContigABGDPD000000000
SAMN24255080
AUSMDU00049486
GCA_023332705.1ContigABGDOZ000000000
SAMN24254996
AUSMDU00036021
GCA_023332675.1ContigABGDOX000000000
SAMN24254994
AUSMDU00036019
GCA_023332665.1ContigABGDOY000000000
SAMN24254995
AUSMDU00036020
GCA_023332645.1ContigABGDOV000000000
SAMN24254992
AUSMDU00036017
GCA_023332625.1ContigABGDOW000000000
SAMN24254993
AUSMDU00036018
GCA_023332605.1ContigABGDOU000000000
SAMN24254912
AUSMDU00022470
GCA_023332585.1ContigABGDOP000000000
SAMN24254987
AUSMDU00036012
GCA_023332565.1ContigABGDOS000000000
SAMN24254990
AUSMDU00036015
GCA_023332505.1ContigABGDOT000000000
SAMN24254991
AUSMDU00036016
GCA_023332535.1ContigABGDOR000000000
SAMN24254989
AUSMDU00036014
GCA_023332525.1ContigABGDOO000000000
SAMN24254986
AUSMDU00036011
GCA_023333385.1ContigABGDQF000000000
SAMN24254997
AUSMDU00036022
GCA_023333365.1ContigABGDQC000000000
SAMN24254936
AUSMDU00022494
GCA_023333345.1ContigABGDQD000000000
SAMN24254937
AUSMDU00022495
GCA_023333305.1ContigABGDQE000000000
SAMN24254938
AUSMDU00022496
GCA_023333275.1ContigABGDQB000000000
SAMN24254935
AUSMDU00022493
GCA_023333265.1ContigABGDPX000000000
SAMN24254932
AUSMDU00022490
GCA_023333245.1ContigABGDQA000000000
SAMN24254934
AUSMDU00022492
GCA_023333225.1ContigABGDPY000000000
SAMN24254906
AUSMDU00022464
GCA_023333205.1ContigABGDPZ000000000
SAMN24254933
AUSMDU00022491
GCA_023332485.1ContigABGDOQ000000000
SAMN24254988
AUSMDU00036013
GCA_023332465.1ContigABGDON000000000
SAMN24254985
AUSMDU00036010
GCA_023332425.1ContigABGDOL000000000
SAMN24254983
AUSMDU00036008
GCA_023332445.1ContigABGDOM000000000
SAMN24254984
AUSMDU00036009
GCA_023332405.1ContigABGDOJ000000000
SAMN24254911
AUSMDU00022469
GCA_023332385.1ContigABGDOK000000000
SAMN24254982
AUSMDU00036007
GCA_023332365.1ContigABGDOI000000000
SAMN24254981
AUSMDU00036006
GCA_023332345.1ContigABGDOH000000000
SAMN24254980
AUSMDU00036005
GCA_023332325.1ContigABGDOG000000000
SAMN24254979
AUSMDU00036004
GCA_023332305.1ContigABGDOD000000000
SAMN24254977
AUSMDU00036002
GCA_023332265.1ContigABGDOF000000000
SAMN24254978
AUSMDU00036003
GCA_023332285.1ContigABGDOE000000000
SAMN24254976
AUSMDU00036001
GCA_023332245.1ContigABGDOC000000000
SAMN24254975
AUSMDU00036000
GCA_023332225.1ContigABGDOB000000000
SAMN24254974
AUSMDU00035999
GCA_023332185.1ContigABGDOA000000000
SAMN24254973
AUSMDU00035998
GCA_023332205.1ContigABGDNY000000000
SAMN24254972
AUSMDU00035997
GCA_023332165.1ContigABGDNZ000000000
SAMN24254910
AUSMDU00022468
GCA_023332145.1ContigABGDNX000000000
SAMN24254971
AUSMDU00035996
GCA_023332125.1ContigABGDNV000000000
SAMN24254968
AUSMDU00035993
GCA_023332105.1ContigABGDNS000000000
SAMN24255076
AUSMDU00049312
GCA_023332085.1ContigABGDNW000000000
SAMN24254970
AUSMDU00035995
GCA_023332065.1ContigABGDNT000000000
SAMN24255075
AUSMDU00049311
GCA_023332045.1ContigABGDNU000000000
SAMN24254969
AUSMDU00035994
GCA_023332025.1ContigABGDNR000000000
SAMN24255074
AUSMDU00049310
GCA_023332005.1ContigABGDNQ000000000
SAMN24255073
AUSMDU00049309
GCA_023331985.1ContigABGDNP000000000
SAMN24255071
AUSMDU00049307
GCA_023331965.1ContigABGDNN000000000
SAMN24254921
AUSMDU00022479
GCA_023331945.1ContigABGDNO000000000
SAMN24255069
AUSMDU00049304
GCA_023331925.1ContigABGDNL000000000
SAMN24255066
AUSMDU00049301
GCA_023331905.1ContigABGDNM000000000
SAMN24255068
AUSMDU00049303
GCA_023331885.1ContigABGDNK000000000
SAMN24255065
AUSMDU00049300
GCA_023331865.1ContigABGDNI000000000
SAMN24255062
AUSMDU00049296
GCA_023331845.1ContigABGDNJ000000000
SAMN24255064
AUSMDU00049299
GCA_023331825.1ContigABGDNH000000000
SAMN24255063
AUSMDU00049298
GCA_023331805.1ContigABGDNG000000000
SAMN24255061
AUSMDU00049295
GCA_023331785.1ContigABGDNF000000000
SAMN24255060
AUSMDU00049292
GCA_023331765.1ContigABGDNE000000000
SAMN24255059
AUSMDU00049291
GCA_023331745.1ContigABGDNC000000000
SAMN24255058
AUSMDU00049290
GCA_023331725.1ContigABGDND000000000
SAMN24254920
AUSMDU00022478
GCA_023331705.1ContigABGDNB000000000
SAMN24255057
AUSMDU00049289
GCA_023331685.1ContigABGDMY000000000
SAMN24255055
AUSMDU00049286
GCA_023331665.1ContigABGDNA000000000
SAMN24255056
AUSMDU00049287
GCA_023331645.1ContigABGDMZ000000000
SAMN24255054
AUSMDU00049285
GCA_023331625.1ContigABGDMW000000000
SAMN24255104
AUSMDU00052122
GCA_023331605.1ContigABGDMX000000000
SAMN24255053
AUSMDU00049284
GCA_023331585.1ContigABGDMV000000000
SAMN24255103
AUSMDU00052081
GCA_023331565.1ContigABGDMT000000000
SAMN24254919
AUSMDU00022477
GCA_023331545.1ContigABGDMU000000000
SAMN24255101
AUSMDU00052068
GCA_023331525.1ContigABGDMS000000000
SAMN24254967
AUSMDU00035992
GCA_023331505.1ContigABGDMR000000000
SAMN24254966
AUSMDU00035990
GCA_023331485.1ContigABGDMP000000000
SAMN24254964
AUSMDU00035988
GCA_023331465.1ContigABGDMQ000000000
SAMN24254965
AUSMDU00035989
GCA_023331445.1ContigABGDMO000000000
SAMN24254963
AUSMDU00035987
GCA_023331425.1ContigABGDMN000000000
SAMN24254909
AUSMDU00022467
GCA_023331405.1ContigABGDMM000000000
SAMN24254962
AUSMDU00035986
GCA_023331365.1ContigABGDML000000000
SAMN24254960
AUSMDU00035984
GCA_023331385.1ContigABGDMJ000000000
SAMN24254961
AUSMDU00035985
GCA_023331345.1ContigABGDMK000000000
SAMN24254959
AUSMDU00035983
GCA_023331325.1ContigABGDMH000000000
SAMN24254958
AUSMDU00022518
GCA_023331305.1ContigABGDMI000000000
SAMN24254956
AUSMDU00022516
GCA_023331285.1ContigABGDMG000000000
SAMN24254957
AUSMDU00022517
GCA_023331265.1ContigABGDMB000000000
SAMN24254955
AUSMDU00022515
GCA_023331245.1ContigABGDLY000000000
SAMN24254954
AUSMDU00022514
GCA_023331225.1ContigABGDMD000000000
SAMN24254953
AUSMDU00022513
GCA_023331185.1ContigABGDME000000000
SAMN24254908
AUSMDU00022466
GCA_023331205.1ContigABGDLZ000000000
SAMN24254952
AUSMDU00022512
GCA_023331165.1ContigABGDMC000000000
SAMN24254950
AUSMDU00022509
GCA_023331145.1ContigABGDMF000000000
SAMN24254951
AUSMDU00022511
GCA_023331105.1ContigABGDLX000000000
SAMN24254948
AUSMDU00022507
GCA_023331125.1ContigABGDMA000000000
SAMN24254949
AUSMDU00022508
GCA_023331085.1ContigABGDLU000000000
SAMN24254945
AUSMDU00022504
GCA_023331065.1ContigABGDLV000000000
SAMN24254947
AUSMDU00022506
GCA_023331045.1ContigABGDLW000000000
SAMN24254946
AUSMDU00022505
GCA_023331025.1ContigABGDLT000000000
SAMN24254944
AUSMDU00022503
GCA_023331005.1ContigABGDLR000000000
SAMN24254942
AUSMDU00022501
GCA_023330985.1ContigABGDLQ000000000
SAMN24254907
AUSMDU00022465
GCA_023330965.1ContigABGDLP000000000
SAMN24254941
AUSMDU00022500
GCA_023330945.1ContigABGDLO000000000
SAMN24254940
AUSMDU00022499
GCA_023330925.1ContigABGDLS000000000
SAMN24254943
AUSMDU00022502
GCA_023330565.1ContigABGDLN000000000
SAMN24254939
AUSMDU00022497
GCA_023330545.1ContigABGDLM000000000
SAMN24255100
AUSMDU00052067
GCA_023330525.1ContigABGDLL000000000
SAMN24255098
AUSMDU00051361
GCA_023330505.1ContigABGDLK000000000
SAMN24255095
AUSMDU00051267
GCA_023330485.1ContigABGDLI000000000
SAMN24255052
AUSMDU00036594
GCA_023330445.1ContigABGDLJ000000000
SAMN24255091
AUSMDU00021619
GCA_023330455.1ContigABGDLH000000000
SAMN24254918
AUSMDU00022476
GCA_023330425.1ContigABGDLF000000000
SAMN24255050
AUSMDU00036592
GCA_023330405.1ContigABGDLG000000000
SAMN24255051
AUSMDU00036593
GCA_023330385.1ContigABGDLE000000000
SAMN24255049
AUSMDU00036591
GCA_023330365.1ContigABGDLD000000000
SAMN24255048
AUSMDU00036590
GCA_023330345.1ContigABGDLC000000000
SAMN24255047
AUSMDU00036589
GCA_023330325.1ContigABGDLB000000000
SAMN24255046
AUSMDU00036588
GCA_023330305.1ContigABGDLA000000000
SAMN24255045
AUSMDU00036587
GCA_023330285.1ContigABGDKY000000000
SAMN24255044
AUSMDU00036585
GCA_023330265.1ContigABGDKZ000000000
SAMN24255043
AUSMDU00036583
GCA_023330245.1ContigABGDKX000000000
SAMN24254917
AUSMDU00022475
GCA_023330225.1ContigABGDKV000000000
SAMN24255040
AUSMDU00036580
GCA_023330205.1ContigABGDKW000000000
SAMN24255042
AUSMDU00036582
GCA_023330185.1ContigABGDKU000000000
SAMN24255039
AUSMDU00036579
GCA_023330165.1ContigABGDKT000000000
SAMN24255038
AUSMDU00036578
GCA_023330145.1ContigABGDKS000000000
SAMN24255037
AUSMDU00036577
GCA_023330125.1ContigABGDKR000000000
SAMN24255036
AUSMDU00036576
GCA_023330105.1ContigABGDKP000000000
SAMN24255034
AUSMDU00036574
GCA_023330085.1ContigABGDKO000000000
SAMN24255033
AUSMDU00036573
GCA_023330065.1ContigABGDKQ000000000
SAMN24255035
AUSMDU00036575
GCA_023330045.1ContigABGDKN000000000
SAMN24254916
AUSMDU00022474
GCA_023330025.1ContigABGDKM000000000
SAMN24255032
AUSMDU00036572
GCA_023330005.1ContigABGDKL000000000
SAMN24255031
AUSMDU00036571
GCA_023329985.1ContigABGDKI000000000
SAMN24255028
AUSMDU00036568
GCA_023329965.1ContigABGDKK000000000
SAMN24255030
AUSMDU00036570
GCA_023329945.1ContigABGDKJ000000000
SAMN24255029
AUSMDU00036569
GCA_023329925.1ContigABGDKH000000000
SAMN24255027
AUSMDU00036567
GCA_023329905.1ContigABGDKF000000000
SAMN24255025
AUSMDU00036565
GCA_023329885.1ContigABGDKG000000000
SAMN24255026
AUSMDU00036566
GCA_023329865.1ContigABGDKE000000000
SAMN24255024
AUSMDU00036564
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SAMN24255023
AUSMDU00036563
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SAMN24255021
AUSMDU00036561
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SAMN24254915
AUSMDU00022473
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SAMN24255020
AUSMDU00036560
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SAMN24255022
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SAMN24255017
AUSMDU00036190
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SAMN24255013
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SAMN24255016
AUSMDU00036189
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SAMN24255015
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SAMN24255014
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AUSMDU00036183
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SAMN24255009
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SAMN24255007
AUSMDU00036178
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SAMN24254913
AUSMDU00022471
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SAMN24254904
AUSMDU00022462
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SAMN24255005
AUSMDU00036175
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SAMN24255004
AUSMDU00036174
GCA_023329405.1ContigABGDJJ000000000
SAMN24255003
AUSMDU00036029
GCA_045040535.1Complete genomeSAMN24255088
AUSMDU00049496
GCA_020474145.1ContigABDGFE000000000
SAMN18617435
AUSMDU00033204
GCA_020474125.1ContigABDGFH000000000
SAMN18617295
AUSMDU00033034
GCA_020474245.1ContigABDGFF000000000
SAMN18617373
AUSMDU00033140
GCA_020474205.1ContigABDGFD000000000
SAMN18618415
AUSMDU00006625
GCA_020474085.1ContigABDGFA000000000
SAMN18619139
AUSMDU00017487
GCA_020474065.1ContigABDGFC000000000
SAMN18619145
AUSMDU00017564
GCA_020474045.1ContigABDGFB000000000
SAMN18619148
AUSMDU00017570
GCA_020474025.1ContigABDGEZ000000000
SAMN18618775
AUSMDU00011269
GCA_020137355.1ContigAAZVIK000000000
SAMN18617272
AUSMDU00016676
GCA_020137335.1ContigAAZWVQ000000000
SAMN18619305
AUSMDU00020990
GCA_019893985.1ContigABCHUV000000000
SAMN18617437
AUSMDU00033206
GCA_019893785.1ContigABCHUO000000000
SAMN18619331
AUSMDU00021108
GCA_019893925.1ContigABCHUU000000000
SAMN18617432
AUSMDU00033201
GCA_019894005.1ContigABCHUW000000000
SAMN18614577
AUSMDU00004555
GCA_018283435.1ContigAAZUNI000000000
SAMN18618235
AUSMDU00005187
GCA_018283415.1ContigAAZULD000000000
SAMN18619101
AUSMDU00016877
GCA_018283395.1ContigAAZUKX000000000
SAMN18618997
AUSMDU00015939
GCA_018973245.1ContigABAXSO000000000
SAMN19777968
AUSMDU00038246
GCA_018973225.1ContigABAXSJ000000000
SAMN19777891
AUSMDU00018116
GCA_018973205.1ContigABAXSM000000000
SAMN19777892
AUSMDU00018884
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