Staphylococcus (ID 648411) - BioProject

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Accession: PRJNA648411 ID: 648411

Staphylococcus

Sequencing of clinical staphylococcal isolates from Alexandria, Egypt

The project aims to describe the population structure and molecular epidemiology of staphylococcal clinical isolates collected from Alexandria Main University Hospital (AMUH) in 2015. More...

Accession	PRJNA648411
Data Type	Genome sequencing and assembly
Scope	Multispecies
Organism	Staphylococcus[Taxonomy ID: 1279] Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus
Submission	Registration date: 12-Jan-2021 Faculty of Pharmacy, Alexandria University
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	66
SRA Experiments	66
Other datasets
BioSample	66
Assembly	66

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Contig

Total

13
53
66

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_016621065.1	JAEOVY000000000	SAMN15640992	AA60	Staphylococcus aureus
GCA_016621245.1	JAEOVZ000000000	SAMN15640993	AA61	Staphylococcus aureus
GCA_016621195.1	JAEOWQ000000000	SAMN15641010	AA92	Staphylococcus aureus
GCA_016621185.1	JAEOWS000000000	SAMN15641012	AA94	Staphylococcus aureus
GCA_016621165.1	JAEOWU000000000	SAMN15641014	AA99	Staphylococcus aureus
GCA_016621835.1	JAEOVL000000000	SAMN15640979	AA39	Staphylococcus aureus
GCA_016621825.1	JAEOVK000000000	SAMN15640978	AA36	Staphylococcus aureus
GCA_016621795.1	JAEOVM000000000	SAMN15640980	AA4	Staphylococcus aureus
GCA_016621775.1	JAEOVH000000000	SAMN15640975	AA32	Staphylococcus aureus
GCA_016621765.1	JAEOVO000000000	SAMN15640982	AA45	Staphylococcus aureus
GCA_016621745.1	JAEOVG000000000	SAMN15640974	AA31	Staphylococcus aureus
GCA_016621705.1	JAEOVI000000000	SAMN15640976	AA33	Staphylococcus aureus
GCA_016621695.1	JAEOWE000000000	SAMN15640998	AA67	Staphylococcus aureus
GCA_016621685.1	JAEOVJ000000000	SAMN15640977	AA35	Staphylococcus aureus
GCA_016621665.1	JAEOWH000000000	SAMN15641001	AA70	Staphylococcus aureus
GCA_016621645.1	JAEOVT000000000	SAMN15640987	AA53	Staphylococcus aureus
GCA_016621615.1	JAEOWD000000000	SAMN15640997	AA65	Staphylococcus aureus
GCA_016621595.1	JAEOWG000000000	SAMN15641000	AA69	Staphylococcus aureus
GCA_016621585.1	JAEOVU000000000	SAMN15640988	AA55	Staphylococcus aureus
GCA_016621555.1	JAEOWB000000000	SAMN15640995	AA63	Staphylococcus aureus
GCA_016621535.1	JAEOWC000000000	SAMN15640996	AA64	Staphylococcus aureus
GCA_016621525.1	JAEOWA000000000	SAMN15640994	AA62	Staphylococcus aureus
GCA_016621505.1	JAEOWF000000000	SAMN15640999	AA68	Staphylococcus aureus
GCA_016621485.1	JAEOUU000000000	SAMN15640962	AA104	Staphylococcus aureus
GCA_016621445.1	JAEOWJ000000000	SAMN15641003	AA77	Staphylococcus aureus
GCA_016621435.1	JAEOWK000000000	SAMN15641004	AA78	Staphylococcus aureus
GCA_016621425.1	JAEOUS000000000	SAMN15640960	AA101	Staphylococcus aureus
GCA_016621395.1	JAEOWP000000000	SAMN15641009	AA91	Staphylococcus aureus
GCA_016621385.1	JAEOWL000000000	SAMN15641005	AA79	Staphylococcus aureus
GCA_016621365.1	JAEOWI000000000	SAMN15641002	AA76	Staphylococcus aureus
GCA_016621335.1	JAEOWT000000000	SAMN15641013	AA95	Staphylococcus aureus
GCA_016621305.1	JAEOVX000000000	SAMN15640991	AA6	Staphylococcus aureus
GCA_016620995.1	JAEOUR000000000	SAMN15640959	AA1	Staphylococcus aureus
GCA_016620985.1	JAEOUV000000000	SAMN15640963	AA13	Staphylococcus aureus
GCA_016620955.1	JAEOUW000000000	SAMN15640964	AA14	Staphylococcus aureus
GCA_016620935.1	JAEOUT000000000	SAMN15640961	AA103	Staphylococcus aureus
GCA_016620925.1	JAEOUX000000000	SAMN15640965	AA17	Staphylococcus aureus
GCA_016620895.1	JAEOUY000000000	SAMN15640966	AA18	Staphylococcus aureus
GCA_016620885.1	JAEOUZ000000000	SAMN15640967	AA2	Staphylococcus aureus
GCA_016620855.1	JAEOVC000000000	SAMN15640970	AA27	Staphylococcus aureus
GCA_016620815.1	JAEOVE000000000	SAMN15640972	AA3	Staphylococcus aureus
GCA_016620825.1	JAEOVA000000000	SAMN15640968	AA22	Staphylococcus aureus
GCA_016620795.1	JAEOVD000000000	SAMN15640971	AA29	Staphylococcus aureus
GCA_016620785.1	JAEOVB000000000	SAMN15640969	AA23	Staphylococcus aureus
GCA_016620765.1	JAEOVN000000000	SAMN15640981	AA41	Staphylococcus aureus
GCA_016620705.1	JAEOVQ000000000	SAMN15640984	AA5	Staphylococcus aureus
GCA_016620715.1	JAEOVF000000000	SAMN15640973	AA30	Staphylococcus aureus
GCA_016620685.1	JAEOVP000000000	SAMN15640983	AA46	Staphylococcus aureus
GCA_016620695.1	JAEOVR000000000	SAMN15640985	AA51	Staphylococcus aureus
GCA_016620665.1	JAEOVS000000000	SAMN15640986	AA52	Staphylococcus aureus
GCA_016620645.1	JAEOWN000000000	SAMN15641007	AA80	Staphylococcus aureus
GCA_016620605.1	JAEOWR000000000	SAMN15641011	AA93	Staphylococcus aureus
GCA_016620585.1	JAEOWM000000000	SAMN15641006	AA8	Staphylococcus aureus
GCA_016620565.1	JAEOVW000000000	SAMN15640990	AA59	Staphylococcus aureus
GCA_016620575.1	JAEOWO000000000	SAMN15641008	AA87	Staphylococcus aureus
GCA_016620545.1	JAEOVV000000000	SAMN15640989	AA57	Staphylococcus aureus
GCA_016621295.1	JAEOXD000000000	SAMN15641023	AA84	Staphylococcus haemolyticus
GCA_016621285.1	JAEOXE000000000	SAMN15641024	AA89	Staphylococcus haemolyticus
GCA_016621265.1	JAEOWV000000000	SAMN15641015	AA12	Staphylococcus haemolyticus
GCA_016621145.1	JAEOWY000000000	SAMN15641018	AA42	Staphylococcus haemolyticus
GCA_016621105.1	JAEOXC000000000	SAMN15641022	AA83	Staphylococcus haemolyticus
GCA_016621115.1	JAEOXA000000000	SAMN15641020	AA73	Staphylococcus haemolyticus
GCA_016621085.1	JAEOXB000000000	SAMN15641021	AA82	Staphylococcus haemolyticus
GCA_016621215.1	JAEOWZ000000000	SAMN15641019	AA48	Staphylococcus haemolyticus
GCA_016621035.1	JAEOWW000000000	SAMN15641016	AA34	Staphylococcus haemolyticus
GCA_016621015.1	JAEOWX000000000	SAMN15641017	AA40	Staphylococcus haemolyticus

SRA Data Details

Parameter	Value
Data volume, Gbases	26
Data volume, Mbytes	11884

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Staphylococcus

Sequencing of clinical staphylococcal isolates from Alexandria, Egypt

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