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Links from Nucleotide

Accession: PRJNA556761 ID: 556761

Oryzias melastigma isolate:bigg-433 (Indian medaka)

Oryzias melastigma isolate:bigg-433 Genome sequencing and assembly

See Genome Information for Oryzias melastigma
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43 additional projects are related by organism.
Oryzias melastigma is becoming a useful fish model for marine and estuarine ecotoxicology studies. A high-quality, complete assembly of marine medaka will enhance its values in the ocean toxicology
AccessionPRJNA556761
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismOryzias melastigma[Taxonomy ID: 30732]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias; Oryzias melastigma
PublicationsLiang P et al., "Long-read sequencing and de novo genome assembly of marine medaka (Oryzias melastigma).", BMC Genomics, 2020 Sep 16;21(1):640
SubmissionRegistration date: 12-Aug-2020
Xiamen University
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)970
WGS master1
SRA Experiments8
Protein Sequences25699
Publications
PubMed1
PMC1
Other datasets
BioSample9
Assembly1
Assembly details:
AssemblyLevelWGSBioSampleTaxonomy
GCA_014170095.1ScaffoldWKFB00000000SAMN12368440
Oryzias melastigma
SRA Data Details
ParameterValue
Data volume, Gbases358
Data volume, Tbytes0.13

Supplemental Content

Related information

LinkOut to external resources

  • GOLD: Gp0604704 [Genomes On Line Database]
    GOLD: Gp0604704
    Genomes On Line Database

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