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Genome Information for Rattus rattus
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Genome assembly for Rattus rattus (New Zealand), completed using 130x total of illumina paired-end data, Oxford nanopore PromethION and HiC by the New Zealand Rat genome consortium (CSIRO, PF2050, University of Auckland & University of Otago)
| Accession | PRJNA574245 |
| Data Type | Genome sequencing and assembly |
| Scope | Monoisolate |
| Organism | Rattus rattus[Taxonomy ID: 10117] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus; Rattus rattus |
| Publications | Robins JH et al., "Dating of divergences within the Rattus genus phylogeny using whole mitochondrial genomes.", Mol Phylogenet Evol, 2008 Nov;49(2):460-6 |
| Submission | Registration date: 4-Mar-2020
CSIRO Applied Genomics Initiative |
| Relevance | Environmental |
| Locus Tag Prefix | F7H05 |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 21 |
| WGS master | 1 |
| Publications |
| PubMed | 1 |
| Other datasets |
| BioSample | 1 |
| Assembly | 1 |
Related RefSeq Project
PRJNA612505 : Rattus rattus isolate:New Zealand RefSeq Genome sequencing