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Links from Nucleotide

Accession: PRJNA485700 ID: 485700

Planctomycetales

Planctomycetes strains from diverse aquatic habitats - Genome sequencing and assembly

For good reasons, most studies on bacteria rely on well-established model organisms. More...
AccessionPRJNA485700
Data TypeGenome sequencing and assembly
ScopeMultispecies
OrganismPlanctomycetales[Taxonomy ID: 112]
Bacteria; Planctomycetota; Planctomycetia; Planctomycetales
Publications (total 3)
  • Kallscheuer N et al., "Rhodopirellula heiligendammensis sp. nov., Rhodopirellula pilleata sp. nov., and Rhodopirellula solitaria sp. nov. isolated from natural or artificial marine surfaces in Northern Germany and California, USA, and emended description of the genus Rhodopirellula.", Antonie Van Leeuwenhoek, 2020 Dec;113(12):1737-1750
More...
SubmissionRegistration date: 7-Aug-2019
Radboud Universiteit Nijmegen
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)743
WGS master25
Genomic DNA64
Protein Sequences432572
Publications
PubMed3
Other datasets
BioSample79
Assembly79
Assembly details:
Assembly levelNumber of Assemblies
28
26
20
5
79
AssemblyLevelWGSChrsBioSampleStrainTaxonomy
GCA_007748035.1Complete genomeSAMN10953992
Pan181
GCA_007743815.1ChromosomeSAMN10954009
CA12
GCA_007860105.1ScaffoldSJPU00000000
SAMN10954034
Poly21
GCA_007859855.1ScaffoldSJPK00000000
SAMN10954007
CA85
GCA_007747655.1Complete genomeSAMN10953900
ETA_A8
GCA_008087625.1Complete genomeSAMN10980024
OJF2
GCA_007752135.1Complete genomeSAMN10953988
Q31a
GCA_007859755.1ScaffoldSJPF00000000
SAMN10953990
Enr8
GCA_007859955.1ScaffoldSJPR00000000
SAMN10954021
Pla108
GCA_007859815.1ScaffoldSJPH00000000
SAMN10954020
Pla111
GCA_007753265.1ChromosomeSAMN10953901
Spa11
GCA_007748115.1Complete genomeSAMN10954004
Pan97
GCA_008065115.1ChromosomeSAMN10980023
Pr1d
GCA_007860015.1ScaffoldSJPS00000000
SAMN10954023
Pla144
GCA_007745435.1ChromosomeSAMN10953975
V22
GCA_007860005.1ContigSMSM00000000
SAMN10953968
B188
GCA_007859995.1ContigSMSL00000000
SAMN10953969
S225
GCA_007745175.1ChromosomeSAMN10954003
Pan44
GCA_007859875.1ScaffoldSJPL00000000
SAMN10953997
Pan14r
GCA_007860215.1ScaffoldSJPZ00000000
SAMN10953979
V7
GCA_007752935.1ChromosomeSAMN10954016
Mal65
GCA_008065095.1Complete genomeSAMN10980026
DSM 5831
GCA_007744675.1ChromosomeSAMN10953993
Pan241w
GCA_007746795.1ChromosomeSAMN10953991
Pan161
GCA_007748175.1ChromosomeSAMN10953985
V202
GCA_007748195.1ChromosomeSAMN10953984
V144
GCA_007748135.1ChromosomeSAMN10953978
V6
GCA_007746535.1ChromosomeSAMN10954017
MalM14
GCA_007744075.1ChromosomeSAMN10953987
HG66A1
GCA_007754425.1ChromosomeSAMN10953996
Enr17
GCA_007746295.1ChromosomeSAMN10954013
Mal35
GCA_007747015.1Complete genomeSAMN10954008
CA11
GCA_008298035.1Complete genomeSAMN10980027
DSM 8797
GCA_007748155.1ChromosomeSAMN10953998
Enr10
GCA_007748015.1Complete genomeSAMN10953976
Pan110
GCA_007751945.1Complete genomeSAMN10953977
Pan153
GCA_007746075.1ChromosomeSAMN10953903
I41
GCA_007751035.1Complete genomeSAMN10954030
Pla85_3_4
GCA_007747795.1Complete genomeSAMN10953974
Mal4
GCA_008087665.1Complete genomeSAMN10980025
FC18
GCA_007748075.1Complete genomeSAMN10954002
Pan265
GCA_007859915.1ScaffoldSJPM00000000
SAMN10954026
Pla100
GCA_007860135.1ScaffoldSJPV00000000
SAMN10954036
Poly41
GCA_007860185.1ScaffoldSJPY00000000
SAMN10953986
Q31b
GCA_007860095.1ScaffoldSJPT00000000
SAMN10954024
Pla52o
GCA_007859745.1ContigSMLU00000000
SAMN10953970
RAS1
GCA_007753915.1Complete genomeSAMN10953971
RAS2
GCA_007750855.1Complete genomeSAMN10954029
Pla175
GCA_007859835.1ScaffoldSJPJ00000000
SAMN10954006
CA13
GCA_007745835.1ChromosomeSAMN10954018
MalM25
GCA_007748055.1Complete genomeSAMN10953995
Pan216
GCA_007748095.1Complete genomeSAMN10954031
Pla133
GCA_007750655.1Complete genomeSAMN10954028
Pla163
GCA_007751255.1Complete genomeSAMN10954032
Pla86
GCA_007751475.1Complete genomeSAMN10954038
Poly30
GCA_007745635.1ChromosomeSAMN10953904
SV_7m_r
GCA_007752345.1Complete genomeSAMN10954039
spb1
GCA_007750395.1Complete genomeSAMN10954027
Pla110
GCA_007747445.1Complete genomeSAMN10954040
KS4
GCA_007859935.1ContigSJPO00000000
SAMN10954022
Pla123a
GCA_007859945.1ScaffoldSJPQ00000000
SAMN10954011
Mal64
GCA_008065135.1Complete genomeSAMN10980022
UC8
GCA_007753095.1ChromosomeSAMN10954037
Poly24
GCA_007751715.1Complete genomeSAMN10954010
CA51
GCA_007752755.1ChromosomeSAMN10954012
Mal33
GCA_007859715.1ScaffoldSJPG00000000
SAMN10953989
Pan54
GCA_007859865.1ScaffoldSJPI00000000
SAMN10954019
Pla22
GCA_008374075.1ContigVRLW00000000
SAMN10980019
LF1
GCA_007860175.1ScaffoldSJPX00000000
SAMN10954033
Poly59
GCA_007860125.1ScaffoldSJPW00000000
SAMN10954035
Poly51
GCA_007754155.1ChromosomeSAMN10953999
Enr13
GCA_007860045.1ScaffoldSJPN00000000
SAMN10954025
Pla52n
GCA_007744515.1ChromosomeSAMN10954000
Pan189
GCA_007744975.1ChromosomeSAMN10954001
Pan258
GCA_007747995.1Complete genomeSAMN10954015
Mal52
GCA_007860075.1ScaffoldSJPP00000000
SAMN10954005
CA54
GCA_007752535.1ChromosomeSAMN10953994
ElP
GCA_007744255.1ChromosomeSAMN10954014
Mal48
GCA_007747215.1Complete genomeSAMN10953902
ETA_A1

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