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Accession: PRJNA418890 ID: 418890

marine sediment metagenome

Metagenomic sequencing from Guaymas Basin Metagenome

Genomic reconstruction of ANME and Bathyarchaeota genomes from Guaymas Basin sediment
AccessionPRJNA418890
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismmarine sediment metagenome[Taxonomy ID: 412755]
unclassified sequences; metagenomes; ecological metagenomes; marine sediment metagenome
PublicationsWang Y et al., "Diverse anaerobic methane- and multi-carbon alkane-metabolizing archaea coexist and show activity in Guaymas Basin hydrothermal sediment.", Environ Microbiol, 2019 Apr;21(4):1344-1355
SubmissionRegistration date: 1-Oct-2018
Shanghai Jiao Tong University
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)2324
WGS master20
Protein Sequences25403
Publications
PubMed1
Other datasets
BioSample21
Assembly20
Assembly details:
Assembly levelNumber of Assemblies
16
4
20
AssemblyLevelWGSBioSampleIsolateTaxonomy
GCA_003601535.1ContigPIXW00000000SAMN08103063
WYZ-LMO14
GCA_003604315.1ScaffoldPIYK00000000SAMN08103049
M10_bin185
GCA_003601875.1ScaffoldPIYF00000000SAMN08103054
M10_bin214
GCA_003601845.1ScaffoldPIYC00000000SAMN08103057
M10_bin26
GCA_003601885.1ScaffoldPIYM00000000SAMN08103047
M10_bin143
GCA_003601835.1ScaffoldPIYB00000000SAMN08103058
M8_bin162
GCA_003601605.1ScaffoldPIXZ00000000SAMN08103060
M8_bin1642
GCA_003601595.1ScaffoldPIXY00000000SAMN08103061
M8_bin26
GCA_003601785.1ScaffoldPIYA00000000SAMN08103059
M8_bin163
GCA_003601775.1ScaffoldPIYN00000000SAMN08103046
M10_bin139
GCA_003601715.1ScaffoldPIYI00000000SAMN08103051
M10_bin190
GCA_003601725.1ScaffoldPIYJ00000000SAMN08103050
M10_bin190
GCA_003601735.1ScaffoldPIYL00000000SAMN08103048
M10_bin182
GCA_003601695.1ScaffoldPIYH00000000SAMN08103052
M10_bin190
GCA_003601665.1ScaffoldPIYG00000000SAMN08103053
M10_bin208
GCA_003601655.1ScaffoldPIYE00000000SAMN08103055
M10_bin241
GCA_003601635.1ScaffoldPIYD00000000SAMN08103056
M10_bin242
GCA_003601555.1ContigPIXX00000000SAMN08103062
WYZ-LMO15
GCA_003601795.1ContigPIXU00000000SAMN08103065
WYZ-LMO13
GCA_003601545.1ContigPIXV00000000SAMN08103064
WYZ-LMO12

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