Staphylococcus aureus (ID 344860) - BioProject

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Accession: PRJNA344860 ID: 344860

Staphylococcus aureus

Identification and studies of factors involved in staphylococcal virulence using genomics and proteomics.

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6539 additional projects are related by organism.

As the aim of this project, we intend to examine the correlation between genotype, phenotype (proteome and virulence) of carefully selected strains of Staphylococcus aureus, in order to identify and characterize the factors affecting the observed biological effect (the ability to effectively colonize the host and develop an infection).

Accession	PRJNA344860
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Staphylococcus aureus[Taxonomy ID: 1280] Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus
Publications	Bonar E et al., "Identification of Secreted Exoproteome Fingerprints of Highly-Virulent and Non-Virulent Staphylococcus aureus Strains.", Front Cell Infect Microbiol, 2016;6:51 Polakowska K et al., "The virulence of Staphylococcus aureus correlates with strain genotype in a chicken embryo model but not a nematode model.", Microbes Infect, 2012 Nov;14(14):1352-62
Grants	"Identification and studies of factors involved in staphylococcal virulence using genomics and proteomics." (Grant ID UMO-2012/07/D/NZ2/04282, National Science Centre)
Submission	Registration date: 24-Jul-2018 Jagiellonian University
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	457
WGS master	7
Genomic DNA	21
SRA Experiments	11
Protein Sequences	25458
Publications
PubMed	2
PMC	1
Other datasets
BioSample	19
Assembly	9

Assembly details:

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Assembly level

Number of Assemblies

Chromosome

Contig

Total

2
7
9

Assembly	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_003343155.1		3	SAMN05853507	ch21	Staphylococcus aureus
GCA_003336625.1	MOYG00000000		SAMN05853510	ch3	Staphylococcus aureus
GCA_003336635.1	MSGQ00000000		SAMN05853511	ch5	Staphylococcus aureus
GCA_003336575.1	MOXP00000000		SAMN05853515	pa3	Staphylococcus aureus
GCA_003336565.1	MOYK00000000		SAMN05853516	ph2	Staphylococcus aureus
GCA_003336555.1	MOYJ00000000		SAMN05853514	ch24	Staphylococcus aureus
GCA_003336545.1	MOYI00000000		SAMN05853513	ch23	Staphylococcus aureus
GCA_003336495.1	MOYH00000000		SAMN05853512	ch9	Staphylococcus aureus
GCA_003350605.1		3	SAMN05853508	ch22	Staphylococcus aureus

SRA Data Details

Parameter	Value
Data volume, Gbases	7
Data volume, Mbytes	3735

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Staphylococcus aureus

Identification and studies of factors involved in staphylococcal virulence using genomics and proteomics.

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