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Accession: PRJDB7087 ID: 475057

Bacteria

A project of associating bacterial WGS and AST data

By associating bacterial whole-genome sequence (WGS) and antimicrobial susceptibility testing (AST) data, we aim to predict antimicrobial susceptibility profile of the organisms from WGS data
AccessionPRJDB7087
Data TypeGenome sequencing and assembly
ScopeMultiisolate
SubmissionRegistration date: 29-Jun-2018
Toho University
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)44364
WGS master247
SRA Experiments247
Other datasets
BioSample247
Assembly247
Assembly details:
Assembly levelNumber of Assemblies
247
247
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_003306735.1ContigBGYU00000000SAMD00126592
TUM18767
GCA_003306775.1ContigBGYW00000000SAMD00126594
TUM18769
GCA_003306755.1ContigBGYV00000000SAMD00126593
TUM18768
GCA_003306675.1ContigBGYR00000000SAMD00126589
TUM18764
GCA_003306715.1ContigBGYT00000000SAMD00126591
TUM18766
GCA_003306695.1ContigBGYS00000000SAMD00126590
TUM18765
GCA_003306795.1ContigBGYX00000000SAMD00126595
TUM18770
GCA_003306815.1ContigBGYY00000000SAMD00126596
TUM18771
GCA_003306975.1ContigBGZG00000000SAMD00126604
TUM18779
GCA_003306955.1ContigBGZF00000000SAMD00126603
TUM18778
GCA_003306935.1ContigBGZE00000000SAMD00126602
TUM18777
GCA_003306915.1ContigBGZD00000000SAMD00126601
TUM18776
GCA_003306895.1ContigBGZC00000000SAMD00126600
TUM18775
GCA_003306875.1ContigBGZB00000000SAMD00126599
TUM18774
GCA_003306855.1ContigBGZA00000000SAMD00126598
TUM18773
GCA_003306835.1ContigBGYZ00000000SAMD00126597
TUM18772
GCA_003306655.1ContigBGYQ00000000SAMD00126588
TUM18763
GCA_003306575.1ContigBGYM00000000SAMD00126584
TUM18759
GCA_003306555.1ContigBGYL00000000SAMD00126583
TUM18758
GCA_003306635.1ContigBGYP00000000SAMD00126587
TUM18762
GCA_003306615.1ContigBGYO00000000SAMD00126586
TUM18761
GCA_003306595.1ContigBGYN00000000SAMD00126585
TUM18760
GCA_003306535.1ContigBGYK00000000SAMD00126582
TUM18757
GCA_003306515.1ContigBGYJ00000000SAMD00126581
TUM18756
GCA_003306495.1ContigBGYI00000000SAMD00126580
TUM18755
GCA_003306475.1ContigBGYH00000000SAMD00126579
TUM18754
GCA_003306455.1ContigBGYG00000000SAMD00126578
TUM18753
GCA_003306435.1ContigBGYF00000000SAMD00126577
TUM18752
GCA_003306415.1ContigBGYE00000000SAMD00126576
TUM18751
GCA_003306395.1ContigBGYD00000000SAMD00126575
TUM18750
GCA_003306375.1ContigBGYC00000000SAMD00126574
TUM18749
GCA_003306355.1ContigBGYB00000000SAMD00126573
TUM18748
GCA_003306335.1ContigBGYA00000000SAMD00126572
TUM18747
GCA_003306315.1ContigBGXZ00000000SAMD00126571
TUM18746
GCA_003306295.1ContigBGXY00000000SAMD00126570
TUM18745
GCA_003306275.1ContigBGXX00000000SAMD00126569
TUM18744
GCA_003306255.1ContigBGXW00000000SAMD00126568
TUM18743
GCA_003306235.1ContigBGXV00000000SAMD00126567
TUM18742
GCA_003306215.1ContigBGXU00000000SAMD00126566
TUM18741
GCA_003306195.1ContigBGXT00000000SAMD00126565
TUM18740
GCA_003306175.1ContigBGXS00000000SAMD00126564
TUM18739
GCA_003306155.1ContigBGXR00000000SAMD00126563
TUM18738
GCA_003306135.1ContigBGXQ00000000SAMD00126562
TUM18737
GCA_003306115.1ContigBGXP00000000SAMD00126561
TUM18736
GCA_003306095.1ContigBGXO00000000SAMD00126560
TUM18735
GCA_003306055.1ContigBGXM00000000SAMD00126558
TUM18733
GCA_003306075.1ContigBGXN00000000SAMD00126559
TUM18734
GCA_003306035.1ContigBGXL00000000SAMD00126557
TUM18732
GCA_003306015.1ContigBGXK00000000SAMD00126556
TUM18731
GCA_003305995.1ContigBGXJ00000000SAMD00126555
TUM18730
GCA_003305975.1ContigBGXI00000000SAMD00126554
TUM18729
GCA_003305955.1ContigBGXH00000000SAMD00126553
TUM18728
GCA_003305935.1ContigBGXG00000000SAMD00126552
TUM18727
GCA_003305915.1ContigBGXF00000000SAMD00126551
TUM18726
GCA_003305895.1ContigBGXE00000000SAMD00126550
TUM18725
GCA_003305875.1ContigBGXD00000000SAMD00126549
TUM18724
GCA_003305855.1ContigBGXC00000000SAMD00126548
TUM18723
GCA_003305835.1ContigBGXB00000000SAMD00126547
TUM18722
GCA_003305815.1ContigBGXA00000000SAMD00126546
TUM18721
GCA_003305795.1ContigBGWZ00000000SAMD00126545
TUM18720
GCA_003305775.1ContigBGWY00000000SAMD00126544
TUM18719
GCA_003305755.1ContigBGWX00000000SAMD00126543
TUM18718
GCA_003305735.1ContigBGWW00000000SAMD00126542
TUM18717
GCA_003305715.1ContigBGWV00000000SAMD00126541
TUM18716
GCA_003305695.1ContigBGWU00000000SAMD00126540
TUM18715
GCA_003305675.1ContigBGWT00000000SAMD00126539
TUM18714
GCA_003305655.1ContigBGWS00000000SAMD00126538
TUM18713
GCA_003305635.1ContigBGWR00000000SAMD00126537
TUM18712
GCA_003305595.1ContigBGWP00000000SAMD00126535
TUM18710
GCA_003305615.1ContigBGWQ00000000SAMD00126536
TUM18711
GCA_003305575.1ContigBGWO00000000SAMD00126534
TUM18709
GCA_003305555.1ContigBGWN00000000SAMD00126533
TUM18708
GCA_003305535.1ContigBGWM00000000SAMD00126532
TUM18707
GCA_003305515.1ContigBGWL00000000SAMD00126531
TUM18706
GCA_003305495.1ContigBGWK00000000SAMD00126530
TUM18705
GCA_003305475.1ContigBGWJ00000000SAMD00126529
TUM18704
GCA_003305455.1ContigBGWI00000000SAMD00126528
TUM18703
GCA_003305435.1ContigBGWH00000000SAMD00126527
TUM18702
GCA_003305415.1ContigBGWG00000000SAMD00126526
TUM18701
GCA_003305395.1ContigBGWF00000000SAMD00126525
TUM18700
GCA_003305375.1ContigBGWE00000000SAMD00126524
TUM18699
GCA_003305355.1ContigBGWD00000000SAMD00126523
TUM18698
GCA_003305335.1ContigBGWC00000000SAMD00126522
TUM18697
GCA_003305315.1ContigBGWB00000000SAMD00126521
TUM18696
GCA_003305295.1ContigBGWA00000000SAMD00126520
TUM18695
GCA_003305275.1ContigBGVZ00000000SAMD00126519
TUM18694
GCA_003305235.1ContigBGVX00000000SAMD00126517
TUM18692
GCA_003305215.1ContigBGVW00000000SAMD00126516
TUM18691
GCA_003305255.1ContigBGVY00000000SAMD00126518
TUM18693
GCA_003305195.1ContigBGVV00000000SAMD00126515
TUM18690
GCA_003305155.1ContigBGVT00000000SAMD00126513
TUM18688
GCA_003305135.1ContigBGVS00000000SAMD00126512
TUM18687
GCA_003305175.1ContigBGVU00000000SAMD00126514
TUM18689
GCA_003305115.1ContigBGVR00000000SAMD00126511
TUM18686
GCA_003304965.1ContigBGVN00000000SAMD00126507
TUM18682
GCA_003304895.1ContigBGVM00000000SAMD00126506
TUM18681
GCA_003304715.1ContigBGVL00000000SAMD00126505
TUM18680
GCA_003305095.1ContigBGVQ00000000SAMD00126510
TUM18685
GCA_003305065.1ContigBGVP00000000SAMD00126509
TUM18684
GCA_003304525.1ContigBGVK00000000SAMD00126504
TUM18679
GCA_003305045.1ContigBGVO00000000SAMD00126508
TUM18683
GCA_003304415.1ContigBGVJ00000000SAMD00126503
TUM18678
GCA_003304315.1ContigBGVI00000000SAMD00126502
TUM18677
GCA_003304175.1ContigBGVH00000000SAMD00126501
TUM18676
GCA_003301275.1ContigBGTR00000000SAMD00126459
TUM18634
GCA_003301305.1ContigBGTS00000000SAMD00126460
TUM18635
GCA_003301455.1ContigBGTX00000000SAMD00126465
TUM18640
GCA_003301415.1ContigBGTW00000000SAMD00126464
TUM18639
GCA_003301395.1ContigBGTV00000000SAMD00126463
TUM18638
GCA_003301355.1ContigBGTT00000000SAMD00126461
TUM18636
GCA_003301375.1ContigBGTU00000000SAMD00126462
TUM18637
GCA_003301825.1ContigBGUE00000000SAMD00126472
TUM18647
GCA_003301745.1ContigBGUD00000000SAMD00126471
TUM18646
GCA_003301715.1ContigBGUC00000000SAMD00126470
TUM18645
GCA_003301645.1ContigBGUB00000000SAMD00126469
TUM18644
GCA_003301585.1ContigBGUA00000000SAMD00126468
TUM18643
GCA_003301535.1ContigBGTZ00000000SAMD00126467
TUM18642
GCA_003301495.1ContigBGTY00000000SAMD00126466
TUM18641
GCA_003302615.1ContigBGUP00000000SAMD00126483
TUM18658
GCA_003302535.1ContigBGUO00000000SAMD00126482
TUM18657
GCA_003302495.1ContigBGUN00000000SAMD00126481
TUM18656
GCA_003302415.1ContigBGUM00000000SAMD00126480
TUM18655
GCA_003302335.1ContigBGUL00000000SAMD00126479
TUM18654
GCA_003302235.1ContigBGUK00000000SAMD00126478
TUM18653
GCA_003302175.1ContigBGUJ00000000SAMD00126477
TUM18652
GCA_003302095.1ContigBGUI00000000SAMD00126476
TUM18651
GCA_003302805.1ContigBGUS00000000SAMD00126486
TUM18661
GCA_003302025.1ContigBGUH00000000SAMD00126475
TUM18650
GCA_003301965.1ContigBGUG00000000SAMD00126474
TUM18649
GCA_003301895.1ContigBGUF00000000SAMD00126473
TUM18648
GCA_003304085.1ContigBGVG00000000SAMD00126500
TUM18675
GCA_003303995.1ContigBGVF00000000SAMD00126499
TUM18674
GCA_003303895.1ContigBGVE00000000SAMD00126498
TUM18673
GCA_003303815.1ContigBGVD00000000SAMD00126497
TUM18672
GCA_003303735.1ContigBGVC00000000SAMD00126496
TUM18671
GCA_003303635.1ContigBGVB00000000SAMD00126495
TUM18670
GCA_003303535.1ContigBGVA00000000SAMD00126494
TUM18669
GCA_003303435.1ContigBGUZ00000000SAMD00126493
TUM18668
GCA_003303275.1ContigBGUY00000000SAMD00126492
TUM18667
GCA_003303145.1ContigBGUX00000000SAMD00126491
TUM18666
GCA_003303085.1ContigBGUW00000000SAMD00126490
TUM18665
GCA_003302995.1ContigBGUV00000000SAMD00126489
TUM18664
GCA_003302875.1ContigBGUT00000000SAMD00126487
TUM18662
GCA_003302935.1ContigBGUU00000000SAMD00126488
TUM18663
GCA_003302735.1ContigBGUR00000000SAMD00126485
TUM18660
GCA_003302665.1ContigBGUQ00000000SAMD00126484
TUM18659
GCA_003298885.1ContigBGRG00000000SAMD00126396
TUM18571
GCA_003298925.1ContigBGRH00000000SAMD00126397
TUM18572
GCA_003299005.1ContigBGRJ00000000SAMD00126399
TUM18574
GCA_003298975.1ContigBGRI00000000SAMD00126398
TUM18573
GCA_003299165.1ContigBGRN00000000SAMD00126403
TUM18578
GCA_003299205.1ContigBGRO00000000SAMD00126404
TUM18579
GCA_003299115.1ContigBGRM00000000SAMD00126402
TUM18577
GCA_003299085.1ContigBGRL00000000SAMD00126401
TUM18576
GCA_003299035.1ContigBGRK00000000SAMD00126400
TUM18575
GCA_003298755.1ContigBGRE00000000SAMD00126394
TUM18569
GCA_003298715.1ContigBGRD00000000SAMD00126393
TUM18568
GCA_003298645.1ContigBGRC00000000SAMD00126392
TUM18567
GCA_003298615.1ContigBGRB00000000SAMD00126391
TUM18566
GCA_003298835.1ContigBGRF00000000SAMD00126395
TUM18570
GCA_003298535.1ContigBGRA00000000SAMD00126390
TUM18565
GCA_003298435.1ContigBGQY00000000SAMD00126388
TUM18563
GCA_003298475.1ContigBGQZ00000000SAMD00126389
TUM18564
GCA_003300015.1ContigBGSK00000000SAMD00126426
TUM18601
GCA_003299975.1ContigBGSJ00000000SAMD00126425
TUM18600
GCA_003299925.1ContigBGSI00000000SAMD00126424
TUM18599
GCA_003299845.1ContigBGSG00000000SAMD00126422
TUM18597
GCA_003299895.1ContigBGSH00000000SAMD00126423
TUM18598
GCA_003299815.1ContigBGSF00000000SAMD00126421
TUM18596
GCA_003299765.1ContigBGSE00000000SAMD00126420
TUM18595
GCA_003299725.1ContigBGSD00000000SAMD00126419
TUM18594
GCA_003299705.1ContigBGSC00000000SAMD00126418
TUM18593
GCA_003299645.1ContigBGSB00000000SAMD00126417
TUM18592
GCA_003299605.1ContigBGSA00000000SAMD00126416
TUM18591
GCA_003299495.1ContigBGRX00000000SAMD00126413
TUM18588
GCA_003299455.1ContigBGRV00000000SAMD00126411
TUM18586
GCA_003299475.1ContigBGRW00000000SAMD00126412
TUM18587
GCA_003299585.1ContigBGRZ00000000SAMD00126415
TUM18590
GCA_003299545.1ContigBGRY00000000SAMD00126414
TUM18589
GCA_003299405.1ContigBGRU00000000SAMD00126410
TUM18585
GCA_003299375.1ContigBGRT00000000SAMD00126409
TUM18584
GCA_003299345.1ContigBGRS00000000SAMD00126408
TUM18583
GCA_003299285.1ContigBGRQ00000000SAMD00126406
TUM18581
GCA_003299235.1ContigBGRP00000000SAMD00126405
TUM18580
GCA_003299305.1ContigBGRR00000000SAMD00126407
TUM18582
GCA_003301215.1ContigBGTP00000000SAMD00126457
TUM18632
GCA_003301195.1ContigBGTO00000000SAMD00126456
TUM18631
GCA_003301175.1ContigBGTN00000000SAMD00126455
TUM18630
GCA_003301235.1ContigBGTQ00000000SAMD00126458
TUM18633
GCA_003301155.1ContigBGTM00000000SAMD00126454
TUM18629
GCA_003301125.1ContigBGTL00000000SAMD00126453
TUM18628
GCA_003301085.1ContigBGTK00000000SAMD00126452
TUM18627
GCA_003301015.1ContigBGTJ00000000SAMD00126451
TUM18626
GCA_003300865.1ContigBGTH00000000SAMD00126449
TUM18624
GCA_003300925.1ContigBGTI00000000SAMD00126450
TUM18625
GCA_003300795.1ContigBGTF00000000SAMD00126447
TUM18622
GCA_003300755.1ContigBGTE00000000SAMD00126446
TUM18621
GCA_003300825.1ContigBGTG00000000SAMD00126448
TUM18623
GCA_003300725.1ContigBGTD00000000SAMD00126445
TUM18620
GCA_003300695.1ContigBGTC00000000SAMD00126444
TUM18619
GCA_003300655.1ContigBGTB00000000SAMD00126443
TUM18618
GCA_003300595.1ContigBGSZ00000000SAMD00126441
TUM18616
GCA_003300635.1ContigBGTA00000000SAMD00126442
TUM18617
GCA_003300525.1ContigBGSX00000000SAMD00126439
TUM18614
GCA_003300565.1ContigBGSY00000000SAMD00126440
TUM18615
GCA_003300475.1ContigBGSW00000000SAMD00126438
TUM18613
GCA_003300425.1ContigBGSV00000000SAMD00126437
TUM18612
GCA_003300395.1ContigBGSU00000000SAMD00126436
TUM18611
GCA_003300325.1ContigBGSS00000000SAMD00126434
TUM18609
GCA_003300345.1ContigBGST00000000SAMD00126435
TUM18610
GCA_003300245.1ContigBGSQ00000000SAMD00126432
TUM18607
GCA_003300195.1ContigBGSP00000000SAMD00126431
TUM18606
GCA_003300275.1ContigBGSR00000000SAMD00126433
TUM18608
GCA_003300115.1ContigBGSN00000000SAMD00126429
TUM18604
GCA_003300165.1ContigBGSO00000000SAMD00126430
TUM18605
GCA_003300085.1ContigBGSM00000000SAMD00126428
TUM18603
GCA_003300035.1ContigBGSL00000000SAMD00126427
TUM18602
GCA_003298415.1ContigBGQX00000000SAMD00126387
TUM18562
GCA_003298375.1ContigBGQW00000000SAMD00126386
TUM18561
GCA_003298325.1ContigBGQV00000000SAMD00126385
TUM18560
GCA_003298275.1ContigBGQT00000000SAMD00126383
TUM18558
GCA_003298215.1ContigBGQR00000000SAMD00126381
TUM18556
GCA_003298175.1ContigBGQQ00000000SAMD00126380
TUM18555
GCA_003298305.1ContigBGQU00000000SAMD00126384
TUM18559
GCA_003298255.1ContigBGQS00000000SAMD00126382
TUM18557
GCA_003298085.1ContigBGQO00000000SAMD00126378
TUM18553
GCA_003298135.1ContigBGQP00000000SAMD00126379
TUM18554
GCA_003298035.1ContigBGQN00000000SAMD00126377
TUM18552
GCA_003298015.1ContigBGQM00000000SAMD00126376
TUM18551
GCA_003297955.1ContigBGQL00000000SAMD00126375
TUM18550
GCA_003297925.1ContigBGQK00000000SAMD00126374
TUM18549
GCA_003297875.1ContigBGQJ00000000SAMD00126373
TUM18548
GCA_003297845.1ContigBGQI00000000SAMD00126372
TUM18547
GCA_003297795.1ContigBGQH00000000SAMD00126371
TUM18546
GCA_003297735.1ContigBGQG00000000SAMD00126370
TUM18545
GCA_003297695.1ContigBGQF00000000SAMD00126369
TUM18544
GCA_003297615.1ContigBGQD00000000SAMD00126367
TUM18542
GCA_003297645.1ContigBGQE00000000SAMD00126368
TUM18543
GCA_003297585.1ContigBGQC00000000SAMD00126366
TUM18541
GCA_003297545.1ContigBGQB00000000SAMD00126365
TUM18540
GCA_003297515.1ContigBGQA00000000SAMD00126364
TUM18539
GCA_003297485.1ContigBGPZ00000000SAMD00126363
TUM18538
GCA_003297455.1ContigBGPY00000000SAMD00126362
TUM18537
GCA_003297405.1ContigBGPX00000000SAMD00126361
TUM18536
GCA_003297365.1ContigBGPW00000000SAMD00126360
TUM18535
GCA_003297305.1ContigBGPU00000000SAMD00126358
TUM18533
GCA_003297345.1ContigBGPV00000000SAMD00126359
TUM18534
SRA Data Details
ParameterValue
Data volume, Gbases104
Data volume, Mbytes65418

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