Escherichia coli (ID 380388) - BioProject

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Accession: PRJNA380388 ID: 380388

Escherichia coli

E. coli genomes from wastewater treatment plant inflow and outflow

See Genome Information for Escherichia coli

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9370 additional projects are related by organism.

The project was set to collect samples of E. coli from different locations of the inflow and the outflow of a wastewater treatment plant in Dresden, Germany.

Accession	PRJNA380388
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Escherichia coli[Taxonomy ID: 562] Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Submission	Registration date: 21-May-2018 BIOTEC
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	14624
WGS master	92
SRA Experiments	103
Other datasets
BioSample	103
Assembly	92

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Total

92
92

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_003146595.1	NBNO00000000	SAMN06670745	Win2012_WWKa_OUT_19	Escherichia coli
GCA_003146575.1	NBLD00000000	SAMN06641777	Aut2013_WWKa_ALT_13	Escherichia coli
GCA_003146555.1	NBLC00000000	SAMN06641778	Aut2013_WWKa_ALT_17	Escherichia coli
GCA_003146525.1	NBLB00000000	SAMN06641779	Aut2013_WWKa_ALT_30	Escherichia coli
GCA_003146515.1	NBLA00000000	SAMN06641780	Aut2013_WWKa_ALT_45	Escherichia coli
GCA_003146495.1	NBKZ00000000	SAMN06641782	Aut2013_WWKa_ALT_48	Escherichia coli
GCA_003146465.1	NBKY00000000	SAMN06641784	Aut2013_WWKa_ALT_59	Escherichia coli
GCA_003146455.1	NBKV00000000	SAMN06641788	Aut2013_WWKa_NEU_44	Escherichia coli
GCA_003146435.1	NBKR00000000	SAMN06641793	Aut2013_WWKa_OUT_10	Escherichia coli
GCA_003146415.1	NBKQ00000000	SAMN06641796	Aut2013_WWKa_OUT_3	Escherichia coli
GCA_003146375.1	NBKI00000000	SAMN06641804	Spr2012_WWKa_OUT_13	Escherichia coli
GCA_003146385.1	NBKF00000000	SAMN06641807	Spr2012_WWKa_OUT_25	Escherichia coli
GCA_003146335.1	NBKW00000000	SAMN06641786	Aut2013_WWKa_ALT_65	Escherichia coli
GCA_003146345.1	NBKX00000000	SAMN06641785	Aut2013_WWKa_NEU_28	Escherichia coli
GCA_003146305.1	NBKU00000000	SAMN06641789	Aut2013_WWKa_NEU_53	Escherichia coli
GCA_003146295.1	NBKT00000000	SAMN06641791	Aut2013_WWKa_NEU_51	Escherichia coli
GCA_003146275.1	NBKS00000000	SAMN06641792	Aut2013_WWKa_OUT_20	Escherichia coli
GCA_003146255.1	NBKP00000000	SAMN06641797	Spr2012_WWKa_ALT_35	Escherichia coli
GCA_003146235.1	NBKO00000000	SAMN06641798	Spr2012_WWKa_ALT_27	Escherichia coli
GCA_003146215.1	NBKN00000000	SAMN06641799	Spr2012_WWKa_NEU_24	Escherichia coli
GCA_003146195.1	NBKM00000000	SAMN06641800	Spr2012_WWKa_NEU_51	Escherichia coli
GCA_003146175.1	NBKL00000000	SAMN06641801	Spr2012_WWKa_NEU_31	Escherichia coli
GCA_003146155.1	NBKK00000000	SAMN06641802	Spr2012_WWKa_OUT_12	Escherichia coli
GCA_003146135.1	NBKJ00000000	SAMN06641803	Spr2012_WWKa_NEU_74	Escherichia coli
GCA_003146095.1	NBKG00000000	SAMN06641806	Spr2012_WWKa_OUT_3	Escherichia coli
GCA_003146115.1	NBKH00000000	SAMN06641805	Spr2012_WWKa_OUT_16	Escherichia coli
GCA_003146065.1	NBKE00000000	SAMN06641808	Spr2012_WWKa_OUT_54	Escherichia coli
GCA_003146055.1	NBKD00000000	SAMN06641809	Spr2012_WWKa_OUT_37	Escherichia coli
GCA_003146035.1	NBJY00000000	SAMN06641814	Spr2013_WWKa_ALT_51	Escherichia coli
GCA_003146015.1	NBJX00000000	SAMN06641815	Spr2013_WWKa_ALT_71	Escherichia coli
GCA_003145995.1	NBJU00000000	SAMN06641818	Spr2013_WWKa_NEU_15	Escherichia coli
GCA_003145975.1	NBKC00000000	SAMN06641810	Spr2013_WWKa_ALT_41	Escherichia coli
GCA_003145935.1	NBKA00000000	SAMN06641812	Spr2013_WWKa_ALT_43	Escherichia coli
GCA_003145945.1	NBKB00000000	SAMN06641811	Spr2013_WWKa_ALT_27	Escherichia coli
GCA_003145915.1	NBJZ00000000	SAMN06641813	Spr2013_WWKa_ALT_55	Escherichia coli
GCA_003145895.1	NBJW00000000	SAMN06641816	Spr2013_WWKa_ALT_63	Escherichia coli
GCA_003145875.1	NBJV00000000	SAMN06641817	Spr2013_WWKa_NEU_37	Escherichia coli
GCA_003145855.1	NBJT00000000	SAMN06641819	Spr2013_WWKa_OUT_11	Escherichia coli
GCA_003145835.1	NBJS00000000	SAMN06641820	Spr2013_WWKa_NEU_6	Escherichia coli
GCA_003145795.1	NBJQ00000000	SAMN06641822	Spr2013_WWKa_OUT_15	Escherichia coli
GCA_003145805.1	NBJR00000000	SAMN06641821	Spr2013_WWKa_OUT_29	Escherichia coli
GCA_003145775.1	NBJP00000000	SAMN06641837	Spr2013_WWKa_OUT_45	Escherichia coli
GCA_003145755.1	NBJO00000000	SAMN06641838	Spr2013_WWKa_OUT_32	Escherichia coli
GCA_003145715.1	NBJM00000000	SAMN06641840	Spr2013_WWKa_OUT_5	Escherichia coli
GCA_003145695.1	NBDM00000000	SAMN06641843	Sum2013_WWKa_ALT_27	Escherichia coli
GCA_003145725.1	NBJN00000000	SAMN06641839	Spr2013_WWKa_OUT_55	Escherichia coli
GCA_003145675.1	NBDL00000000	SAMN06641844	Sum2013_WWKa_ALT_41	Escherichia coli
GCA_003145655.1	NBDK00000000	SAMN06641851	Spr2013_WWKa_OUT_27	Escherichia coli
GCA_003145625.1	NBDJ00000000	SAMN06641852	Sum2013_WWKa_NEU_29	Escherichia coli
GCA_003145615.1	NBDH00000000	SAMN06641854	Sum2013_WWKa_NEU_39	Escherichia coli
GCA_003145575.1	NBCX00000000	SAMN06641864	Win2012_WWKa_ALT_54	Escherichia coli
GCA_003145535.1	NBCQ00000000	SAMN06641871	Win2012_WWKa_NEU_37	Escherichia coli
GCA_003145595.1	NBCY00000000	SAMN06641863	Sum2013_WWKa_OUT_5	Escherichia coli
GCA_003145515.1	NBDO00000000	SAMN06641841	Sum2013_WWKa_ALT_20	Escherichia coli
GCA_003145525.1	NBCV00000000	SAMN06641866	Win2012_WWKa_NEU_1	Escherichia coli
GCA_003145495.1	NBDN00000000	SAMN06641842	Spr2013_WWKa_OUT_56	Escherichia coli
GCA_003145465.1	NBDI00000000	SAMN06641853	Sum2013_WWKa_ALT_44	Escherichia coli
GCA_003145435.1	NBDF00000000	SAMN06641856	Sum2013_WWKa_NEU_53	Escherichia coli
GCA_003145445.1	NBDG00000000	SAMN06641855	Sum2013_WWKa_NEU_46	Escherichia coli
GCA_003145415.1	NBDE00000000	SAMN06641857	Sum2013_WWKa_OUT_21	Escherichia coli
GCA_003145395.1	NBDD00000000	SAMN06641858	Sum2013_WWKa_OUT_2	Escherichia coli
GCA_003145375.1	NBDC00000000	SAMN06641859	Sum2013_WWKa_OUT_31	Escherichia coli
GCA_003145355.1	NBDB00000000	SAMN06641860	Sum2013_WWKa_OUT_3	Escherichia coli
GCA_003145335.1	NBDA00000000	SAMN06641861	Sum2013_WWKa_OUT_49	Escherichia coli
GCA_003145305.1	NBCW00000000	SAMN06641865	Win2012_WWKa_ALT_49	Escherichia coli
GCA_003145295.1	NBCZ00000000	SAMN06641862	Sum2013_WWKa_OUT_39	Escherichia coli
GCA_003145275.1	NBCU00000000	SAMN06641867	Win2012_WWKa_ALT_65	Escherichia coli
GCA_003145255.1	NBCT00000000	SAMN06641868	Win2012_WWKa_NEU_12	Escherichia coli
GCA_003145235.1	NBCR00000000	SAMN06641870	Win2012_WWKa_NEU_16	Escherichia coli
GCA_003145215.1	NBCS00000000	SAMN06641869	Win2012_WWKa_NEU_19	Escherichia coli
GCA_003145195.1	NBCK00000000	SAMN06641872	Win2012_WWKa_NEU_31	Escherichia coli
GCA_003145165.1	NBCD00000000	SAMN06641879	Win2012_WWKa_OUT_26	Escherichia coli
GCA_003145155.1	NBCF00000000	SAMN06641877	Win2012_WWKa_OUT_21	Escherichia coli
GCA_003145125.1	NBBX00000000	SAMN06641901	Win2013_WWKa_ALT_23	Escherichia coli
GCA_003145115.1	NBBU00000000	SAMN06641928	Win2013_WWKa_NEU_65	Escherichia coli
GCA_003145085.1	NBBS00000000	SAMN06641932	Win2013_WWKa_OUT_24	Escherichia coli
GCA_003145075.1	NBCI00000000	SAMN06641874	Win2012_WWKa_OUT_14	Escherichia coli
GCA_003145045.1	NBCJ00000000	SAMN06641873	Win2012_WWKa_NEU_51	Escherichia coli
GCA_003145035.1	NBCH00000000	SAMN06641875	Win2012_WWKa_NEU_7	Escherichia coli
GCA_003145015.1	NBCB00000000	SAMN06641881	Win2012_WWKa_OUT_35	Escherichia coli
GCA_003144995.1	NBCE00000000	SAMN06641878	Win2012_WWKa_OUT_33	Escherichia coli
GCA_003144955.1	NBCC00000000	SAMN06641880	Win2012_WWKa_OUT_29	Escherichia coli
GCA_003144965.1	NBCG00000000	SAMN06641876	Win2012_WWKa_OUT_2	Escherichia coli
GCA_003144925.1	NBBZ00000000	SAMN06641883	Win2012_WWKa_OUT_8	Escherichia coli
GCA_003144915.1	NBBY00000000	SAMN06641884	Win2012_WWKa_OUT_49	Escherichia coli
GCA_003144895.1	NBBW00000000	SAMN06641926	Win2013_WWKa_NEU_60	Escherichia coli
GCA_003144875.1	NBBV00000000	SAMN06641927	Win2013_WWKa_NEU_20	Escherichia coli
GCA_003144845.1	NBBQ00000000	SAMN06641940	Win2013_WWKa_OUT_29	Escherichia coli
GCA_003144835.1	NBBT00000000	SAMN06641931	Win2013_WWKa_OUT_1	Escherichia coli
GCA_003144795.1	NBBP00000000	SAMN06641941	Win2013_WWKa_OUT_3	Escherichia coli
GCA_003144805.1	NBBR00000000	SAMN06641933	Win2013_WWKa_OUT_18	Escherichia coli
GCA_003153995.1	NBCA00000000	SAMN06641882	Win2012_WWKa_OUT_34	Escherichia coli

SRA Data Details

Parameter	Value
Data volume, Gbases	67
Data volume, Mbytes	30171

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Escherichia coli

E. coli genomes from wastewater treatment plant inflow and outflow

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