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Accession: PRJNA419318 ID: 419318

Pseudomonas putida group

various strains of Pseudomonas plecoglossicida and Pseudomonas guariconensis, all containing the metallo-beta-lactamase gene blaVIM-5 Genome sequencing and assembly

Little is known about the environmental distribution of clinically relevant antibiotic resistant bacteria in Africa. More...

Accession	PRJNA419318
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Adelowo OO et al., "Detection of the carbapenemase gene bla(VIM-5) in members of the Pseudomonas putida group isolated from polluted Nigerian wetlands.", Sci Rep, 2018 Oct 11;8(1):15116 Published online: Adelowo O et al., "Detection of the carbapenemase gene blaVIM-5 in members of the Pseudomonas putida group isolated from polluted Nigerian wetlands", Scientific Reports, 2018;8(1)
Submission	Registration date: 21-Nov-2017 Helmholtz Centre for Environmental Research - UFZ GmbH
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	734
WGS master	9
Protein Sequences	47391
Publications
PubMed	1
PMC	1
Other datasets
BioSample	9
Assembly	9

Assembly details:

Assembly level

Number of Assemblies

Scaffold

9
9

Assembly	Level	WGS	BioSample	Strain	Taxonomy
GCA_002864815.1		PJCR00000000	SAMN08049184	MR149	Pseudomonas guariconensis
GCA_002864915.1		PJCP00000000	SAMN08049182	MR119	Pseudomonas guariconensis
GCA_002864765.1		PJCQ00000000	SAMN08049183	MR144	Pseudomonas guariconensis
GCA_002864905.1		PJCK00000000	SAMN08049177	MR70	Pseudomonas plecoglossicida
GCA_002864885.1		PJCL00000000	SAMN08049178	MR134	Pseudomonas plecoglossicida
GCA_002864865.1		PJCN00000000	SAMN08049180	MR83	Pseudomonas plecoglossicida
GCA_002864845.1		PJCO00000000	SAMN08049181	MR170	Pseudomonas plecoglossicida
GCA_002864795.1		PJCM00000000	SAMN08049179	MR135	Pseudomonas plecoglossicida
GCA_002864775.1		PJCJ00000000	SAMN08049176	MR69	Pseudomonas plecoglossicida

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GOLD: 9 Sequencing Projects [Genomes On Line Database]
GOLD: 9 Sequencing Projects
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Pseudomonas putida group
Pseudomonas putida group
various strains of Pseudomonas plecoglossicida and Pseudomonas guariconensis, all containing the metallo-beta-lactamase gene blaVIM-5 Genome sequencing and assembly

BioProject
BioProject Links for Nucleotide (Select 1321264434) (1)
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