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Links from Nucleotide

Accession: PRJNA339751 ID: 339751

Snodgrassella alvi

Snodgrassella alvi Genome sequencing and assembly

See Genome Information for Snodgrassella alvi
Sequencing of Snodgrassella alvi strains isolated from the guts of honey bees and bumble bees
AccessionPRJNA339751
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismSnodgrassella alvi[Taxonomy ID: 1196083]
Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Neisseriales; Neisseriaceae; Snodgrassella; Snodgrassella alvi
Grants
  • "Genomics, functional roles, and diversity of the symbiotic gut microbiotae of honey bees and bumble bees" (Grant ID DEB1415604, National Science Foundation)
  • "Host and symbiont determinants of colonization by a co-evolved gut community" (Grant ID R01 GM108477, National Institute of General Medical Sciences)
SubmissionRegistration date: 16-Nov-2017
University of Texas at Austin
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)2019
WGS master28
Protein Sequences61167
Other datasets
BioSample28
Assembly28
Assembly details:
Assembly levelNumber of Assemblies
3
25
28
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_002777325.1ContigMDUZ00000000SAMN05606827
Pens2-2-5
GCA_002777925.1ScaffoldMEIX00000000SAMN05661198
MS1-3
GCA_002777575.1ContigMEIS00000000SAMN05609470
Nev3CBA3
GCA_002777495.1ContigMDVG00000000SAMN05607048
Fer4-2
GCA_002777425.1ContigMDVC00000000SAMN05606853
App4-8
GCA_002777465.1ContigMDVD00000000SAMN05606854
App6-4
GCA_002777875.1ScaffoldMEIW00000000SAMN05661194
PEB0178
GCA_002777865.1ScaffoldMEIV00000000SAMN05661192
PEB0171
GCA_002777855.1ContigMEIK00000000SAMN05614856
wkB298
GCA_002777825.1ContigMEIR00000000SAMN05609471
Nev4-2
GCA_002777815.1ContigMEII00000000SAMN05614860
wkB339
GCA_002777795.1ContigMEIT00000000SAMN05609469
HK9x
GCA_002777775.1ContigMEIM00000000SAMN05614849
wkB237
GCA_002777745.1ContigMEIO00000000SAMN05609474
WF3-3
GCA_002777735.1ContigMEIN00000000SAMN05614846
wkB9
GCA_002777705.1ContigMEIU00000000SAMN05609468
HK3
GCA_002777695.1ContigMEIJ00000000SAMN05614859
wkB332
GCA_002777675.1ContigMEIP00000000SAMN05609473
Ruf1-X
GCA_002777655.1ContigMEIL00000000SAMN05614852
wkB273
GCA_002777315.1ContigMDVB00000000SAMN05606852
App2-2
GCA_002777635.1ContigMEIQ00000000SAMN05609472
Occ4-2
GCA_002777615.1ContigMDVI00000000SAMN05607053
Gris1-6
GCA_002777595.1ContigMDVJ00000000SAMN05607058
Gris3-4
GCA_002777485.1ContigMDVF00000000SAMN05607042
Fer2-2
GCA_002777415.1ContigMDVE00000000SAMN05607040
Fer1-2
GCA_002777525.1ContigMDVH00000000SAMN05607050
Gris1-3
GCA_002777345.1ContigMDVA00000000SAMN05606851
Snod2-1-5
GCA_002777335.1ContigMDUY00000000SAMN05606424
Gris2-3-4

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