Staphylococcus aureus strain:MRSA ST5 (ID 290378) - BioProject

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Accession: PRJNA290378 ID: 290378

Staphylococcus aureus strain:MRSA ST5

Staphylococcus aureus subsp. aureus genome sequencing

See Genome Information for Staphylococcus aureus

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Genome sequencing of MRSA ST5 strains isolated from humans (with no contact with swine, short-term contact with swine, or long-term contact with swine), animals, and environmental samples collected from swine farms in the U.S.

Accession	PRJNA290378
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Staphylococcus aureus[Taxonomy ID: 1280] Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus
Grants	"Origin, evolution, and zoonotic potential of livestock-associated methicillin-resistant Staphylococcus aureus found in US swine farms" (Grant ID NPB #14-124, National Pork Board)
Submission	Registration date: 5-Jan-2017 USDA-ARS
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	27036
WGS master	170
SRA Experiments	154
Protein Sequences	453242
Other datasets
BioSample	170
Assembly	170

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Total

170
170

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_002303835.1	LLBE00000000	SAMN03893326	BD11451	Staphylococcus aureus
GCA_002303825.1	LLBF00000000	SAMN03893327	BD12072	Staphylococcus aureus
GCA_002304635.1	LKWK00000000	SAMN03893250	ISU 909	Staphylococcus aureus
GCA_002304615.1	LKXR00000000	SAMN03893283	ISU 954	Staphylococcus aureus
GCA_001936915.1	LLAN00000000	SAMN03893383	UCI 48	Staphylococcus aureus
GCA_001936895.1	LLAR00000000	SAMN03893387	UCI 52	Staphylococcus aureus
GCA_001936855.1	LLAI00000000	SAMN03893378	UCI 43	Staphylococcus aureus
GCA_001936845.1	LLAL00000000	SAMN03893381	UCI 46	Staphylococcus aureus
GCA_001936835.1	LKZK00000000	SAMN03893354	UCI 19	Staphylococcus aureus
GCA_001936785.1	LKZS00000000	SAMN03893362	UCI 27	Staphylococcus aureus
GCA_001936775.1	LKZC00000000	SAMN03893346	UCI 11	Staphylococcus aureus
GCA_001936765.1	LLAK00000000	SAMN03893380	UCI 45	Staphylococcus aureus
GCA_001936755.1	LKZP00000000	SAMN03893359	UCI 24	Staphylococcus aureus
GCA_001936715.1	LKZM00000000	SAMN03893356	UCI 21	Staphylococcus aureus
GCA_001936705.1	LKZA00000000	SAMN03893344	UCI 9	Staphylococcus aureus
GCA_001936695.1	LKYU00000000	SAMN03893338	UCI 3	Staphylococcus aureus
GCA_001937005.1	LLBD00000000	SAMN03893399	UCI 64	Staphylococcus aureus
GCA_001936985.1	LLAV00000000	SAMN03893391	UCI 56	Staphylococcus aureus
GCA_002272995.1	LKVJ00000000	SAMN03893310	ISU 1001	Staphylococcus aureus
GCA_002275985.1	LLBV00000000	SAMN03893322	MN 6	Staphylococcus aureus
GCA_002276025.1	LLBW00000000	SAMN03893323	MN 7	Staphylococcus aureus
GCA_002275955.1	LLBO00000000	SAMN03893317	MN 1	Staphylococcus aureus
GCA_002275965.1	LLBP00000000	SAMN03893318	MN 2	Staphylococcus aureus
GCA_002275945.1	LLBN00000000	SAMN03893335	BD14811	Staphylococcus aureus
GCA_002275875.1	LLBI00000000	SAMN03893330	BD13938	Staphylococcus aureus
GCA_002275895.1	LLBL00000000	SAMN03893333	BD14436	Staphylococcus aureus
GCA_002275885.1	LLBH00000000	SAMN03893329	BD13582	Staphylococcus aureus
GCA_002275865.1	LLAY00000000	SAMN03893394	UCI 59	Staphylococcus aureus
GCA_002275825.1	LLAW00000000	SAMN03893392	UCI 57	Staphylococcus aureus
GCA_002275795.1	LLAQ00000000	SAMN03893386	UCI 51	Staphylococcus aureus
GCA_002275815.1	LLAU00000000	SAMN03893390	UCI 55	Staphylococcus aureus
GCA_002275745.1	LLAC00000000	SAMN03893372	UCI 37	Staphylococcus aureus
GCA_002275785.1	LLAH00000000	SAMN03893377	UCI 42	Staphylococcus aureus
GCA_002275755.1	LLAE00000000	SAMN03893374	UCI 39	Staphylococcus aureus
GCA_002275705.1	LLAB00000000	SAMN03893371	UCI 36	Staphylococcus aureus
GCA_002275715.1	LKZV00000000	SAMN03893365	UCI 30	Staphylococcus aureus
GCA_002275665.1	LKZU00000000	SAMN03893364	UCI 29	Staphylococcus aureus
GCA_002275675.1	LKZT00000000	SAMN03893363	UCI 28	Staphylococcus aureus
GCA_002275635.1	LKZO00000000	SAMN03893358	UCI 23	Staphylococcus aureus
GCA_002275625.1	LKZN00000000	SAMN03893357	UCI 22	Staphylococcus aureus
GCA_002275585.1	LKZG00000000	SAMN03893350	UCI 15	Staphylococcus aureus
GCA_002275595.1	LKZI00000000	SAMN03893352	UCI 17	Staphylococcus aureus
GCA_002275555.1	LKZE00000000	SAMN03893348	UCI 13	Staphylococcus aureus
GCA_002275545.1	LKZF00000000	SAMN03893349	UCI 14	Staphylococcus aureus
GCA_002275515.1	LKZD00000000	SAMN03893347	UCI 12	Staphylococcus aureus
GCA_002275505.1	LKYV00000000	SAMN03893339	UCI 4	Staphylococcus aureus
GCA_002275465.1	LKYD00000000	SAMN03893295	ISU 973	Staphylococcus aureus
GCA_002275455.1	LKYH00000000	SAMN03893299	ISU 980	Staphylococcus aureus
GCA_002275425.1	LKXY00000000	SAMN03893290	ISU 968	Staphylococcus aureus
GCA_002275435.1	LKYA00000000	SAMN03893292	ISU 970	Staphylococcus aureus
GCA_002275385.1	LKXO00000000	SAMN03893280	ISU 951	Staphylococcus aureus
GCA_002275365.1	LKXS00000000	SAMN03893284	ISU 956	Staphylococcus aureus
GCA_002275355.1	LKXV00000000	SAMN03893287	ISU 962	Staphylococcus aureus
GCA_002275345.1	LKXM00000000	SAMN03893278	ISU 948	Staphylococcus aureus
GCA_002275295.1	LKXE00000000	SAMN03893270	ISU 936	Staphylococcus aureus
GCA_002275285.1	LKXB00000000	SAMN03893267	ISU 933	Staphylococcus aureus
GCA_002275275.1	LKXA00000000	SAMN03893266	ISU 931	Staphylococcus aureus
GCA_002275265.1	LKWX00000000	SAMN03893263	ISU 927	Staphylococcus aureus
GCA_002275195.1	LKWJ00000000	SAMN03893249	ISU 889	Staphylococcus aureus
GCA_002275225.1	LKWW00000000	SAMN03893262	ISU 925	Staphylococcus aureus
GCA_002275205.1	LKWU00000000	SAMN03893260	ISU 922	Staphylococcus aureus
GCA_002275185.1	LKWN00000000	SAMN03893253	ISU 914	Staphylococcus aureus
GCA_002275125.1	LKWA00000000	SAMN03893240	ISU 878	Staphylococcus aureus
GCA_002275105.1	LKVY00000000	SAMN03893238	ISU 876	Staphylococcus aureus
GCA_002275135.1	LKWH00000000	SAMN03893247	ISU 887	Staphylococcus aureus
GCA_002275115.1	LKWD00000000	SAMN03893243	ISU 881	Staphylococcus aureus
GCA_002275055.1	LKVW00000000	SAMN03893236	ISU 874	Staphylococcus aureus
GCA_002275025.1	LLBU00000000	SAMN03893325	MN 50	Staphylococcus aureus
GCA_002275045.1	LKVT00000000	SAMN03893233	ISU 871	Staphylococcus aureus
GCA_002275035.1	LKVU00000000	SAMN03893234	ISU 872	Staphylococcus aureus
GCA_002274995.1	LLBT00000000	SAMN03893321	MN 5	Staphylococcus aureus
GCA_002274975.1	LLBS00000000	SAMN03893320	MN 4	Staphylococcus aureus
GCA_002274955.1	LLBR00000000	SAMN03893324	MN 38	Staphylococcus aureus
GCA_002274945.1	LLBQ00000000	SAMN03893319	MN 3	Staphylococcus aureus
GCA_002274915.1	LLBM00000000	SAMN03893334	BD14655	Staphylococcus aureus
GCA_002274895.1	LLBJ00000000	SAMN03893331	BD14054	Staphylococcus aureus
GCA_002274875.1	LLBK00000000	SAMN03893332	BD14262	Staphylococcus aureus
GCA_002274855.1	LLBG00000000	SAMN03893328	BD13502	Staphylococcus aureus
GCA_002274845.1	LLBC00000000	SAMN03893398	UCI 63	Staphylococcus aureus
GCA_002274805.1	LLBB00000000	SAMN03893397	UCI 62	Staphylococcus aureus
GCA_002274785.1	LLAZ00000000	SAMN03893395	UCI 60	Staphylococcus aureus
GCA_002274795.1	LLBA00000000	SAMN03893396	UCI 61	Staphylococcus aureus
GCA_002274765.1	LLAX00000000	SAMN03893393	UCI 58	Staphylococcus aureus
GCA_002274695.1	LLAO00000000	SAMN03893384	UCI 49	Staphylococcus aureus
GCA_002274725.1	LLAS00000000	SAMN03893388	UCI 53	Staphylococcus aureus
GCA_002274715.1	LLAT00000000	SAMN03893389	UCI 54	Staphylococcus aureus
GCA_002274685.1	LLAP00000000	SAMN03893385	UCI 50	Staphylococcus aureus
GCA_002274635.1	LLAM00000000	SAMN03893382	UCI 47	Staphylococcus aureus
GCA_002274625.1	LLAF00000000	SAMN03893375	UCI 40	Staphylococcus aureus
GCA_002274615.1	LLAG00000000	SAMN03893376	UCI 41	Staphylococcus aureus
GCA_002274605.1	LLAJ00000000	SAMN03893379	UCI 44	Staphylococcus aureus
GCA_002274555.1	LLAD00000000	SAMN03893373	UCI 38	Staphylococcus aureus
GCA_002274525.1	LKZY00000000	SAMN03893368	UCI 33	Staphylococcus aureus
GCA_002274535.1	LKZZ00000000	SAMN03893369	UCI 34	Staphylococcus aureus
GCA_002274465.1	LKZX00000000	SAMN03893367	UCI 32	Staphylococcus aureus
GCA_002274545.1	LLAA00000000	SAMN03893370	UCI 35	Staphylococcus aureus
GCA_002274475.1	LKZR00000000	SAMN03893361	UCI 26	Staphylococcus aureus
GCA_002274445.1	LKZQ00000000	SAMN03893360	UCI 25	Staphylococcus aureus
GCA_002274455.1	LKZW00000000	SAMN03893366	UCI 31	Staphylococcus aureus
GCA_002274395.1	LKZL00000000	SAMN03893355	UCI 20	Staphylococcus aureus
GCA_002274365.1	LKZJ00000000	SAMN03893353	UCI 18	Staphylococcus aureus
GCA_002274385.1	LKZH00000000	SAMN03893351	UCI 16	Staphylococcus aureus
GCA_002274375.1	LKZB00000000	SAMN03893345	UCI 10	Staphylococcus aureus
GCA_002274335.1	LKYZ00000000	SAMN03893343	UCI 8	Staphylococcus aureus
GCA_002274305.1	LKYY00000000	SAMN03893342	UCI 7	Staphylococcus aureus
GCA_002274295.1	LKYX00000000	SAMN03893341	UCI 6	Staphylococcus aureus
GCA_002274285.1	LKYW00000000	SAMN03893340	UCI 5	Staphylococcus aureus
GCA_002274245.1	LKYT00000000	SAMN03893337	UCI 2	Staphylococcus aureus
GCA_002274235.1	LKYQ00000000	SAMN03893308	ISU 998	Staphylococcus aureus
GCA_002274225.1	LKYS00000000	SAMN03893336	UCI 1	Staphylococcus aureus
GCA_002274205.1	LKYP00000000	SAMN03893307	ISU 996	Staphylococcus aureus
GCA_002274155.1	LKYN00000000	SAMN03893305	ISU 994	Staphylococcus aureus
GCA_002274175.1	LKYO00000000	SAMN03893306	ISU 995	Staphylococcus aureus
GCA_002274115.1	LKYL00000000	SAMN03893303	ISU 992	Staphylococcus aureus
GCA_002274135.1	LKYM00000000	SAMN03893304	ISU 993	Staphylococcus aureus
GCA_002274085.1	LKYJ00000000	SAMN03893301	ISU 982	Staphylococcus aureus
GCA_002274055.1	LKYI00000000	SAMN03893300	ISU 981	Staphylococcus aureus
GCA_002274095.1	LKYK00000000	SAMN03893302	ISU 983	Staphylococcus aureus
GCA_002274035.1	LKYG00000000	SAMN03893298	ISU 979	Staphylococcus aureus
GCA_002274015.1	LKYF00000000	SAMN03893297	ISU 978	Staphylococcus aureus
GCA_002273995.1	LKYE00000000	SAMN03893296	ISU 976	Staphylococcus aureus
GCA_002273975.1	LKYC00000000	SAMN03893294	ISU 972	Staphylococcus aureus
GCA_002273955.1	LKYB00000000	SAMN03893293	ISU 971	Staphylococcus aureus
GCA_002273945.1	LKXZ00000000	SAMN03893291	ISU 969	Staphylococcus aureus
GCA_002273905.1	LKXW00000000	SAMN03893288	ISU 963	Staphylococcus aureus
GCA_002273915.1	LKXX00000000	SAMN03893289	ISU 964	Staphylococcus aureus
GCA_002273845.1	LKXU00000000	SAMN03893286	ISU 961	Staphylococcus aureus
GCA_002273875.1	LKXT00000000	SAMN03893285	ISU 960	Staphylococcus aureus
GCA_002273835.1	LKXQ00000000	SAMN03893282	ISU 953	Staphylococcus aureus
GCA_002273825.1	LKXP00000000	SAMN03893281	ISU 952	Staphylococcus aureus
GCA_002273795.1	LKXL00000000	SAMN03893277	ISU 947	Staphylococcus aureus
GCA_002273785.1	LKXN00000000	SAMN03893279	ISU 949	Staphylococcus aureus
GCA_002273725.1	LKXJ00000000	SAMN03893275	ISU 944	Staphylococcus aureus
GCA_002273755.1	LKXK00000000	SAMN03893276	ISU 946	Staphylococcus aureus
GCA_002273705.1	LKXH00000000	SAMN03893273	ISU 941	Staphylococcus aureus
GCA_002273695.1	LKXG00000000	SAMN03893272	ISU 940	Staphylococcus aureus
GCA_002273685.1	LKXI00000000	SAMN03893274	ISU 943	Staphylococcus aureus
GCA_002273615.1	LKXD00000000	SAMN03893269	ISU 935	Staphylococcus aureus
GCA_002273665.1	LKXF00000000	SAMN03893271	ISU 939	Staphylococcus aureus
GCA_002273605.1	LKWY00000000	SAMN03893264	ISU 928	Staphylococcus aureus
GCA_002273625.1	LKWZ00000000	SAMN03893265	ISU 930	Staphylococcus aureus
GCA_002273585.1	LKXC00000000	SAMN03893268	ISU 934	Staphylococcus aureus
GCA_002273525.1	LKWT00000000	SAMN03893259	ISU 920	Staphylococcus aureus
GCA_002273535.1	LKWS00000000	SAMN03893258	ISU 919	Staphylococcus aureus
GCA_002273545.1	LKWV00000000	SAMN03893261	ISU 924	Staphylococcus aureus
GCA_002273495.1	LKWR00000000	SAMN03893257	ISU 918	Staphylococcus aureus
GCA_002273455.1	LKWP00000000	SAMN03893255	ISU 916	Staphylococcus aureus
GCA_002273475.1	LKWQ00000000	SAMN03893256	ISU 917	Staphylococcus aureus
GCA_002273445.1	LKWO00000000	SAMN03893254	ISU 915	Staphylococcus aureus
GCA_002273415.1	LKWM00000000	SAMN03893252	ISU 913	Staphylococcus aureus
GCA_002273395.1	LKWL00000000	SAMN03893251	ISU 912	Staphylococcus aureus
GCA_002273385.1	LKWI00000000	SAMN03893248	ISU 888	Staphylococcus aureus
GCA_002273345.1	LKWF00000000	SAMN03893245	ISU 883	Staphylococcus aureus
GCA_002273335.1	LKWE00000000	SAMN03893244	ISU 882	Staphylococcus aureus
GCA_002273325.1	LKWG00000000	SAMN03893246	ISU 886	Staphylococcus aureus
GCA_002273305.1	LKWC00000000	SAMN03893242	ISU 880	Staphylococcus aureus
GCA_002273245.1	LKWB00000000	SAMN03893241	ISU 879	Staphylococcus aureus
GCA_002273265.1	LKVZ00000000	SAMN03893239	ISU 877	Staphylococcus aureus
GCA_002273255.1	LKVX00000000	SAMN03893237	ISU 875	Staphylococcus aureus
GCA_002273225.1	LKVV00000000	SAMN03893235	ISU 873	Staphylococcus aureus
GCA_002273165.1	LKVI00000000	SAMN03893309	ISU 1000	Staphylococcus aureus
GCA_002273175.1	LKVM00000000	SAMN03893313	ISU 1007	Staphylococcus aureus
GCA_002273155.1	LKVR00000000	SAMN03893231	ISU 839	Staphylococcus aureus
GCA_002273145.1	LKVS00000000	SAMN03893232	ISU 842	Staphylococcus aureus
GCA_002273085.1	LKVP00000000	SAMN03893316	ISU 1010	Staphylococcus aureus
GCA_002273095.1	LKVQ00000000	SAMN03893230	ISU 837	Staphylococcus aureus
GCA_002273065.1	LKVN00000000	SAMN03893314	ISU 1008	Staphylococcus aureus
GCA_002273075.1	LKVO00000000	SAMN03893315	ISU 1009	Staphylococcus aureus
GCA_002273015.1	LKVL00000000	SAMN03893312	ISU 1004	Staphylococcus aureus
GCA_002272985.1	LKVK00000000	SAMN03893311	ISU 1002	Staphylococcus aureus

SRA Data Details

Parameter	Value
Data volume, Gbases	36
Data volume, Mbytes	19418

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Staphylococcus aureus strain:MRSA ST5

Staphylococcus aureus subsp. aureus genome sequencing

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